Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACH3PB_RS17385 Genome accession   NZ_CP172312
Coordinates   3885470..3885853 (-) Length   127 a.a.
NCBI ID   WP_416396707.1    Uniprot ID   -
Organism   Allohahella sp. A8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3880470..3890853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH3PB_RS17365 (ACH3PB_17365) - 3881281..3882198 (-) 918 WP_416396704.1 CheR family methyltransferase -
  ACH3PB_RS17370 (ACH3PB_17370) - 3882249..3884357 (-) 2109 WP_416396705.1 methyl-accepting chemotaxis protein -
  ACH3PB_RS17375 (ACH3PB_17375) - 3884456..3884998 (-) 543 WP_416396706.1 chemotaxis protein CheW -
  ACH3PB_RS17380 (ACH3PB_17380) pilH 3885020..3885382 (-) 363 WP_344806309.1 twitching motility response regulator PilH -
  ACH3PB_RS17385 (ACH3PB_17385) pilG 3885470..3885853 (-) 384 WP_416396707.1 twitching motility response regulator PilG Regulator
  ACH3PB_RS17390 (ACH3PB_17390) gshB 3886299..3887258 (+) 960 WP_416396708.1 glutathione synthase -
  ACH3PB_RS17395 (ACH3PB_17395) - 3887307..3888182 (+) 876 WP_416396709.1 energy transducer TonB -
  ACH3PB_RS17400 (ACH3PB_17400) ruvX 3888179..3888589 (+) 411 WP_416396710.1 Holliday junction resolvase RuvX -
  ACH3PB_RS17405 (ACH3PB_17405) pyrR 3888622..3889245 (+) 624 WP_416396711.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACH3PB_RS17410 (ACH3PB_17410) - 3889260..3890267 (+) 1008 WP_416396712.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14154.46 Da        Isoelectric Point: 5.2351

>NTDB_id=1066260 ACH3PB_RS17385 WP_416396707.1 3885470..3885853(-) (pilG) [Allohahella sp. A8]
MEDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITAIDGFDALAKIADTKPDIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLGTIREYVNA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1066260 ACH3PB_RS17385 WP_416396707.1 3885470..3885853(-) (pilG) [Allohahella sp. A8]
ATGGAAGACAATTTCGAGAATCTTAAAATCATGGTCATTGATGACAGCAAGACCATTCGCAGGACAGCCGAGACCCTGCT
AAAGAAGGTCGGCTGTGAAGTCATCACCGCCATCGATGGATTCGATGCACTGGCCAAGATTGCCGACACCAAGCCCGACA
TCATATTCGTGGATATCATGATGCCAAGACTCGATGGCTATCAGACGTGTGCCTTAATAAAGAACAACAGTGCTTTCAAG
TCGACCCCCGTCATCATGCTTTCGAGCAAGGATGGCCTATTCGACAAGGCCAAGGGTCGCATCGTCGGCTCCGATCAATA
CCTCACGAAGCCATTCAGTAAAGACGAATTGCTCGGAACCATTCGTGAATATGTCAATGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.165

100

0.772
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37
  micA Streptococcus pneumoniae Cp1015

41.228

89.764

0.37

Multiple sequence alignment