Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFWHB_RS19590 | Genome accession | NZ_CP172298 |
| Coordinates | 4270462..4271037 (+) | Length | 191 a.a. |
| NCBI ID | WP_139744800.1 | Uniprot ID | A0AAP4J776 |
| Organism | Aeromonas sp. A-8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4265462..4276037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFWHB_RS19575 (ACFWHB_19575) | - | 4266085..4266210 (+) | 126 | WP_395949087.1 | hypothetical protein | - |
| ACFWHB_RS19580 (ACFWHB_19580) | uvrA | 4266382..4269210 (-) | 2829 | WP_395949088.1 | excinuclease ABC subunit UvrA | - |
| ACFWHB_RS19585 (ACFWHB_19585) | - | 4269305..4269943 (-) | 639 | WP_162472085.1 | LuxR C-terminal-related transcriptional regulator | - |
| ACFWHB_RS19590 (ACFWHB_19590) | ssb | 4270462..4271037 (+) | 576 | WP_139744800.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFWHB_RS19595 (ACFWHB_19595) | - | 4271195..4271965 (+) | 771 | WP_395949089.1 | substrate-binding periplasmic protein | - |
| ACFWHB_RS19600 (ACFWHB_19600) | - | 4272014..4272136 (-) | 123 | WP_080675244.1 | hypothetical protein | - |
| ACFWHB_RS19605 (ACFWHB_19605) | yjbD | 4272488..4272772 (+) | 285 | WP_162519186.1 | DUF3811 domain-containing protein | - |
| ACFWHB_RS19610 (ACFWHB_19610) | cspA | 4273166..4273378 (+) | 213 | WP_025328559.1 | RNA chaperone/antiterminator CspA | - |
| ACFWHB_RS19615 (ACFWHB_19615) | - | 4273686..4275641 (+) | 1956 | WP_395949090.1 | ligand-gated channel protein | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 20953.37 Da Isoelectric Point: 5.9247
>NTDB_id=1066118 ACFWHB_RS19590 WP_139744800.1 4270462..4271037(+) (ssb) [Aeromonas sp. A-8]
MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTEWHRVVFMGKLAEVAGEYLKKGSQVYV
EGKLQTRKWQDQGGQERYTTEVLVDSFTGVMQMLGGRPQGGAGQGMGGQQSQGNWGQPQQAAPQQAMQRPAAAPQQNMQP
QGGYSRPAQQPQSAPPVYNEPPMDFDDDIPF
MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTEWHRVVFMGKLAEVAGEYLKKGSQVYV
EGKLQTRKWQDQGGQERYTTEVLVDSFTGVMQMLGGRPQGGAGQGMGGQQSQGNWGQPQQAAPQQAMQRPAAAPQQNMQP
QGGYSRPAQQPQSAPPVYNEPPMDFDDDIPF
Nucleotide
Download Length: 576 bp
>NTDB_id=1066118 ACFWHB_RS19590 WP_139744800.1 4270462..4271037(+) (ssb) [Aeromonas sp. A-8]
ATGGCCAGTCGAGGCATCAACAAAGTCATTCTGATCGGTAACCTGGGGCAAGACCCGGAAGTGCGCTACATGCCGAGCGG
CGGTGCCGTGACTAACATCACCCTGGCCACCTCCGACACCTGGCGCGACAAGCAGACCGGTGAGCAGAAAGAGCGTACCG
AGTGGCACCGTGTGGTCTTCATGGGCAAGCTGGCCGAAGTGGCGGGCGAGTACCTGAAGAAGGGTTCCCAGGTCTATGTC
GAAGGCAAGCTGCAGACCCGCAAGTGGCAGGATCAGGGTGGCCAGGAGCGTTACACCACAGAAGTGCTGGTCGACAGCTT
CACCGGCGTGATGCAGATGCTGGGTGGCCGTCCGCAAGGCGGCGCCGGCCAGGGCATGGGCGGTCAACAGTCCCAGGGCA
ACTGGGGCCAACCGCAACAGGCAGCCCCCCAGCAAGCGATGCAGCGCCCGGCCGCAGCCCCGCAGCAGAATATGCAACCA
CAGGGTGGTTACAGTCGTCCGGCCCAGCAGCCGCAGTCCGCACCGCCGGTCTACAACGAACCGCCGATGGATTTCGACGA
CGATATCCCGTTTTAA
ATGGCCAGTCGAGGCATCAACAAAGTCATTCTGATCGGTAACCTGGGGCAAGACCCGGAAGTGCGCTACATGCCGAGCGG
CGGTGCCGTGACTAACATCACCCTGGCCACCTCCGACACCTGGCGCGACAAGCAGACCGGTGAGCAGAAAGAGCGTACCG
AGTGGCACCGTGTGGTCTTCATGGGCAAGCTGGCCGAAGTGGCGGGCGAGTACCTGAAGAAGGGTTCCCAGGTCTATGTC
GAAGGCAAGCTGCAGACCCGCAAGTGGCAGGATCAGGGTGGCCAGGAGCGTTACACCACAGAAGTGCTGGTCGACAGCTT
CACCGGCGTGATGCAGATGCTGGGTGGCCGTCCGCAAGGCGGCGCCGGCCAGGGCATGGGCGGTCAACAGTCCCAGGGCA
ACTGGGGCCAACCGCAACAGGCAGCCCCCCAGCAAGCGATGCAGCGCCCGGCCGCAGCCCCGCAGCAGAATATGCAACCA
CAGGGTGGTTACAGTCGTCCGGCCCAGCAGCCGCAGTCCGCACCGCCGGTCTACAACGAACCGCCGATGGATTTCGACGA
CGATATCCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
69.231 |
100 |
0.707 |
| ssb | Glaesserella parasuis strain SC1401 |
53.968 |
98.953 |
0.534 |
| ssb | Neisseria meningitidis MC58 |
46.809 |
98.429 |
0.461 |
| ssb | Neisseria gonorrhoeae MS11 |
46.237 |
97.382 |
0.45 |