Detailed information NTG1066097

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ACFWHB_RS02445
• Genome accession: NZ_CP172298
• Coordinates: 482609..483481 (-)
• Length: 290 a.a.
• NCBI ID: WP_395949383.1
• Uniprot ID: -
• Organism: Aeromonas sp. A-8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 477609..488481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFWHB_RS02420 (ACFWHB_02420)	secA	477659..480379 (+)	2721	WP_106885651.1	preprotein translocase subunit SecA	-
ACFWHB_RS02425 (ACFWHB_02425)	mutT	480535..480939 (+)	405	WP_395949381.1	8-oxo-dGTP diphosphatase MutT	-
ACFWHB_RS02430 (ACFWHB_02430)	yacG	481012..481206 (-)	195	WP_025328449.1	DNA gyrase inhibitor YacG	-
ACFWHB_RS02435 (ACFWHB_02435)	zapD	481216..481938 (-)	723	WP_162520171.1	cell division protein ZapD	-
ACFWHB_RS02440 (ACFWHB_02440)	coaE	481976..482590 (-)	615	WP_395949382.1	dephospho-CoA kinase	-
ACFWHB_RS02445 (ACFWHB_02445)	pilD	482609..483481 (-)	873	WP_395949383.1	prepilin peptidase	Machinery gene
ACFWHB_RS02450 (ACFWHB_02450)	pilC	483562..484803 (-)	1242	WP_106885656.1	type II secretion system F family protein	Machinery gene
ACFWHB_RS02455 (ACFWHB_02455)	pilB	484934..486640 (-)	1707	WP_395949384.1	PilB family type IVa pilus assembly ATPase TapB	Machinery gene
ACFWHB_RS02460 (ACFWHB_02460)	-	486644..487078 (-)	435	WP_395949385.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ACFWHB_RS02465 (ACFWHB_02465)	nadC	487391..488254 (-)	864	WP_395949386.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 290 a.a.
• Molecular weight: 31904.19 Da
• Isoelectric Point: 6.6290

>NTDB_id=1066097 ACFWHB_RS02445 WP_395949383.1 482609..483481(-) (pilD) [Aeromonas sp. A-8]
MVPLIELAQGLPWLYLSLVFLFSLMVGSFLNVVIHRLPIMLEREWQAEYSDYFGSEVATSPAEPYNLMVPRSRCPHCDHP
IGALENIPLLSWLWLKGRCRQCKAPISARYPLVELLTALLSVAVAATLAPGWGTLAALLLTWVLVALTFIDLDKMLLPDQ
LTLPLLWGGLLFNLAGGLVPLADAVIGAMAGYLVLWGLYWAFKLLTGKEGMGYGDFKLLAALGAWLGWQALPIVLLLSSL
VGAIIGIGLILLRNHHQGKPIPFGPYLAIAGWIALLWGDNITRWYLDIVL

Nucleotide

• Length: 873 bp

>NTDB_id=1066097 ACFWHB_RS02445 WP_395949383.1 482609..483481(-) (pilD) [Aeromonas sp. A-8]
ATGGTGCCTCTGATCGAACTGGCCCAGGGCCTGCCCTGGCTCTATCTCTCCCTGGTTTTTCTCTTCTCCCTGATGGTTGG
CAGCTTCCTCAACGTGGTGATCCATCGCCTGCCCATCATGCTGGAGCGGGAGTGGCAGGCCGAATACAGTGACTACTTCG
GCAGCGAAGTGGCCACCTCCCCCGCCGAGCCCTACAACCTGATGGTGCCGCGCTCCCGCTGCCCGCACTGCGATCACCCC
ATAGGCGCGCTGGAGAACATCCCCCTGTTGAGCTGGCTCTGGCTCAAGGGGCGCTGCCGGCAATGCAAGGCGCCTATCTC
GGCCCGCTATCCCCTGGTCGAGCTGCTGACCGCCCTGTTGTCGGTCGCCGTCGCCGCGACCCTGGCTCCGGGATGGGGTA
CCCTGGCCGCACTCTTGCTGACCTGGGTACTGGTGGCCCTCACCTTCATCGATCTGGACAAGATGTTGCTGCCGGACCAA
CTCACCCTGCCGCTGCTGTGGGGCGGTCTGCTGTTCAATCTGGCGGGGGGCTTAGTGCCGCTGGCCGATGCGGTGATCGG
TGCCATGGCCGGCTATCTGGTGCTCTGGGGCCTCTACTGGGCGTTCAAGCTGCTGACCGGCAAGGAGGGGATGGGCTATG
GAGACTTCAAGCTGCTGGCGGCGCTCGGAGCCTGGCTGGGCTGGCAGGCGCTGCCCATAGTGCTGCTGCTCTCGTCACTG
GTCGGCGCCATCATCGGCATAGGGCTCATACTGCTGCGCAACCATCATCAGGGCAAACCCATCCCCTTTGGCCCCTATCT
CGCCATCGCGGGCTGGATAGCGCTGCTGTGGGGGGATAACATCACCCGCTGGTATCTGGACATCGTTCTCTAG

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-126)

• Type IV leader peptidase family (Peptidase_A24) (139-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	61.754	98.276	0.607
pilD	Vibrio campbellii strain DS40M4	57.093	99.655	0.569
pilD	Acinetobacter nosocomialis M2	53.597	95.862	0.514
pilD	Acinetobacter baumannii D1279779	53.237	95.862	0.51
pilD	Neisseria gonorrhoeae MS11	50	89.655	0.448