Detailed information NTG0106583

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AABJ45_RS04740
• Genome accession: NZ_AP028611
• Coordinates: 932139..933092 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 927139..938092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ45_RS04715	rpmG	927882..928031 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
AABJ45_RS04720 (TKY121527_09360)	secG	928071..928304 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
AABJ45_RS04725 (TKY121527_09370)	rnr	928406..930760 (+)	2355	WP_000654890.1	ribonuclease R	-
AABJ45_RS04730 (TKY121527_09380)	smpB	930723..931190 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
AABJ45_RS04735 (TKY121527_09390)	tehB	931206..932066 (+)	861	WP_000413755.1	SAM-dependent methyltransferase TehB	-
AABJ45_RS04740 (TKY121527_09400)	coiA	932139..933092 (+)	954	WP_000495900.1	competence protein CoiA	Machinery gene
AABJ45_RS04745 (TKY121527_09410)	pepF	933111..934913 (+)	1803	WP_338372449.1	oligoendopeptidase F	Regulator
AABJ45_RS04750 (TKY121527_09420)	-	934915..935628 (+)	714	WP_000230399.1	O-methyltransferase	-
AABJ45_RS04755 (TKY121527_09430)	prsA	935695..936636 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
AABJ45_RS04760 (TKY121527_09440)	-	936754..937095 (-)	342	Protein_939	IS3 family transposase	-
AABJ45_RS04765	-	937508..937603 (+)	96	Protein_940	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=106583 AABJ45_RS04740 WP_000495900.1 932139..933092(+) (coiA) [Streptococcus pneumoniae strain Sep6]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=106583 AABJ45_RS04740 WP_000495900.1 932139..933092(+) (coiA) [Streptococcus pneumoniae strain Sep6]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432