Detailed information NTG0106505

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AABA16_RS04570
• Genome accession: NZ_AP028610
• Coordinates: 889384..890337 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495907.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 884384..895337

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA16_RS04545	rpmG	885127..885276 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
AABA16_RS04550 (TKY124516_08900)	secG	885316..885549 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
AABA16_RS04555 (TKY124516_08910)	rnr	885651..888005 (+)	2355	WP_054363463.1	ribonuclease R	-
AABA16_RS04560 (TKY124516_08920)	smpB	887968..888435 (+)	468	WP_001051753.1	SsrA-binding protein SmpB	-
AABA16_RS04565 (TKY124516_08930)	tehB	888451..889311 (+)	861	WP_000413758.1	SAM-dependent methyltransferase TehB	-
AABA16_RS04570 (TKY124516_08940)	coiA	889384..890337 (+)	954	WP_000495907.1	competence protein CoiA	Machinery gene
AABA16_RS04575 (TKY124516_08950)	pepF	890356..892158 (+)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
AABA16_RS04580 (TKY124516_08960)	-	892160..892873 (+)	714	WP_078152034.1	O-methyltransferase	-
AABA16_RS04585 (TKY124516_08970)	prsA	892940..893881 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
AABA16_RS04590	-	893998..894084 (-)	87	Protein_905	IS3 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38215.81 Da
• Isoelectric Point: 8.8381

>NTDB_id=106505 AABA16_RS04570 WP_000495907.1 889384..890337(+) (coiA) [Streptococcus pneumoniae strain Sep5]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIQQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=106505 AABA16_RS04570 WP_000495907.1 889384..890337(+) (coiA) [Streptococcus pneumoniae strain Sep5]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCAGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432