Detailed information NTG1064864

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACHKST_RS17055
• Genome accession: NZ_CP172011
• Coordinates: 3424914..3426077 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Bv.g1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3419914..3431077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHKST_RS17025	-	3420179..3420598 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACHKST_RS17030	comFC	3420672..3421361 (-)	690	WP_199445943.1	phosphoribosyltransferase family protein	Machinery gene
ACHKST_RS17035	-	3421367..3421651 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
ACHKST_RS17040	comFA	3421709..3423094 (-)	1386	WP_101562487.1	DEAD/DEAH box helicase	Machinery gene
ACHKST_RS17045	-	3423202..3424050 (-)	849	WP_101562488.1	DegV family protein	-
ACHKST_RS17050	degU	3424148..3424837 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACHKST_RS17055	degS	3424914..3426077 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACHKST_RS17060	-	3426300..3426947 (+)	648	WP_060657503.1	YigZ family protein	-
ACHKST_RS17065	-	3426952..3428166 (+)	1215	WP_101562489.1	LCP family protein	-
ACHKST_RS17070	-	3428256..3429332 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACHKST_RS17075	tuaH	3429465..3430661 (-)	1197	WP_101562490.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1064864 ACHKST_RS17055 WP_003151385.1 3424914..3426077(-) (degS) [Bacillus velezensis strain Bv.g1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1064864 ACHKST_RS17055 WP_003151385.1 3424914..3426077(-) (degS) [Bacillus velezensis strain Bv.g1]
ATGAACAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948