Detailed information NTG1064651

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACHFJ9_RS20005
• Genome accession: NZ_CP171887
• Coordinates: 2618708..2619172 (+)
• Length: 154 a.a.
• NCBI ID: WP_395356090.1
• Uniprot ID: -
• Organism: Vibrio sp. D3
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2613708..2624172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHFJ9_RS19990 (ACHFJ9_19990)	pdhR	2615740..2616507 (-)	768	WP_005396680.1	pyruvate dehydrogenase complex transcriptional repressor PdhR	-
ACHFJ9_RS19995 (ACHFJ9_19995)	ampD	2616913..2617464 (-)	552	WP_256954321.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
ACHFJ9_RS20000 (ACHFJ9_20000)	nadC	2617557..2618444 (+)	888	WP_395356088.1	carboxylating nicotinate-nucleotide diphosphorylase	-
ACHFJ9_RS20005 (ACHFJ9_20005)	pilA	2618708..2619172 (+)	465	WP_395356090.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
ACHFJ9_RS20010 (ACHFJ9_20010)	pilB	2619176..2620861 (+)	1686	WP_395356092.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACHFJ9_RS20015 (ACHFJ9_20015)	pilC	2620885..2622108 (+)	1224	WP_017635918.1	type II secretion system F family protein	Machinery gene
ACHFJ9_RS20020 (ACHFJ9_20020)	pilD	2622173..2623042 (+)	870	WP_395356094.1	prepilin peptidase	Machinery gene
ACHFJ9_RS20025 (ACHFJ9_20025)	coaE	2623043..2623657 (+)	615	WP_047008979.1	dephospho-CoA kinase	-

Sequence

Protein

• Length: 154 a.a.
• Molecular weight: 16101.26 Da
• Isoelectric Point: 7.6284

>NTDB_id=1064651 ACHFJ9_RS20005 WP_395356090.1 2618708..2619172(+) (pilA) [Vibrio sp. D3]
MKNSKQKKQQGFTLIELMIVVAIIGILAAFAVPAYQNYTKKATLAEFPKAASAMKLAVELCAHENASNAATFKTNCLSGS
NGVPSKINNLNDISIEAVAGSSGVNVIAKAVAVKGPIASGEQYTMASNYTTSGIEWTGSCQDSNGNSQSDYCPE

Nucleotide

• Length: 465 bp

>NTDB_id=1064651 ACHFJ9_RS20005 WP_395356090.1 2618708..2619172(+) (pilA) [Vibrio sp. D3]
ATGAAAAACAGTAAACAGAAAAAACAGCAAGGTTTTACCTTGATTGAATTAATGATTGTCGTCGCGATTATTGGTATTTT
GGCCGCATTTGCTGTGCCTGCTTATCAAAACTACACAAAAAAAGCGACGCTGGCAGAGTTCCCAAAAGCAGCTTCTGCGA
TGAAGCTAGCCGTTGAGTTGTGTGCACATGAAAATGCATCAAACGCAGCTACTTTTAAAACGAACTGCTTATCTGGTAGT
AATGGTGTACCTTCAAAAATTAACAACCTAAATGATATCTCTATTGAAGCAGTTGCTGGATCATCAGGCGTAAATGTCAT
TGCAAAAGCTGTAGCAGTAAAAGGACCGATTGCTAGTGGAGAACAGTATACTATGGCGTCTAACTACACGACTAGTGGTA
TTGAGTGGACGGGCTCATGTCAAGATTCTAATGGTAATAGCCAATCTGATTACTGTCCTGAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Vibrio campbellii strain DS40M4	55.484	100	0.558