Detailed information NTG0106428

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AABA19_RS04595
• Genome accession: NZ_AP028609
• Coordinates: 901108..902061 (+)
• Length: 317 a.a.
• NCBI ID: WP_042516189.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 896108..907061

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA19_RS04570	rpmG	896851..897000 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
AABA19_RS04575 (TKY121806_09040)	secG	897040..897273 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
AABA19_RS04580 (TKY121806_09050)	rnr	897375..899729 (+)	2355	WP_024475340.1	ribonuclease R	-
AABA19_RS04585 (TKY121806_09060)	smpB	899692..900159 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
AABA19_RS04590 (TKY121806_09070)	tehB	900175..901035 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
AABA19_RS04595 (TKY121806_09080)	coiA	901108..902061 (+)	954	WP_042516189.1	competence protein CoiA	Machinery gene
AABA19_RS04600 (TKY121806_09090)	pepF	902080..903882 (+)	1803	WP_042516187.1	oligoendopeptidase F	Regulator
AABA19_RS04605 (TKY121806_09100)	-	903884..904597 (+)	714	WP_000230399.1	O-methyltransferase	-
AABA19_RS04610 (TKY121806_09110)	prsA	904664..905605 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
AABA19_RS04615 (TKY121806_09120)	-	905724..906065 (-)	342	Protein_911	transposase	-
AABA19_RS04620	-	906477..906572 (+)	96	Protein_912	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38248.88 Da
• Isoelectric Point: 9.1156

>NTDB_id=106428 AABA19_RS04595 WP_042516189.1 901108..902061(+) (coiA) [Streptococcus pneumoniae strain Sep4]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=106428 AABA19_RS04595 WP_042516189.1 901108..902061(+) (coiA) [Streptococcus pneumoniae strain Sep4]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	89.274	100	0.893
coiA	Lactococcus lactis subsp. cremoris KW2	42.901	100	0.438