Detailed information NTG1063380

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACGLYC_RS11985
• Genome accession: NZ_CP171691
• Coordinates: 2470597..2471034 (-)
• Length: 145 a.a.
• NCBI ID: WP_007408322.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain K12
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2465597..2476034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGLYC_RS11930 (ACGLYC_11930)	sinI	2465988..2466161 (+)	174	WP_003153105.1	anti-repressor SinI	Regulator
ACGLYC_RS11935 (ACGLYC_11935)	sinR	2466195..2466530 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
ACGLYC_RS11940 (ACGLYC_11940)	tasA	2466578..2467363 (-)	786	WP_007408329.1	biofilm matrix protein TasA	-
ACGLYC_RS11945 (ACGLYC_11945)	sipW	2467428..2468012 (-)	585	WP_015240205.1	signal peptidase I SipW	-
ACGLYC_RS11950 (ACGLYC_11950)	tapA	2467984..2468655 (-)	672	WP_020954230.1	amyloid fiber anchoring/assembly protein TapA	-
ACGLYC_RS11955 (ACGLYC_11955)	-	2468914..2469243 (+)	330	WP_020954231.1	DUF3889 domain-containing protein	-
ACGLYC_RS11960 (ACGLYC_11960)	-	2469283..2469462 (-)	180	WP_003153093.1	YqzE family protein	-
ACGLYC_RS11965 (ACGLYC_11965)	comGG	2469519..2469896 (-)	378	WP_032866434.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACGLYC_RS11970 (ACGLYC_11970)	comGF	2469897..2470064 (-)	168	WP_235183824.1	ComGF family competence protein	Machinery gene
ACGLYC_RS11975 (ACGLYC_11975)	-	2470061..2470255 (-)	195	WP_225917419.1	hypothetical protein	-
ACGLYC_RS11980 (ACGLYC_11980)	comGE	2470299..2470613 (-)	315	WP_007408323.1	competence type IV pilus minor pilin ComGE	-
ACGLYC_RS11985 (ACGLYC_11985)	comGD	2470597..2471034 (-)	438	WP_007408322.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACGLYC_RS11990 (ACGLYC_11990)	comGC	2471024..2471332 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
ACGLYC_RS11995 (ACGLYC_11995)	comGB	2471337..2472374 (-)	1038	WP_032866436.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACGLYC_RS12000 (ACGLYC_12000)	comGA	2472361..2473431 (-)	1071	WP_012117985.1	competence type IV pilus ATPase ComGA	Machinery gene
ACGLYC_RS12005 (ACGLYC_12005)	-	2473623..2474573 (-)	951	WP_015417820.1	magnesium transporter CorA family protein	-
ACGLYC_RS12010 (ACGLYC_12010)	-	2474719..2476020 (+)	1302	WP_032866438.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16314.79 Da
• Isoelectric Point: 10.2475

>NTDB_id=1063380 ACGLYC_RS11985 WP_007408322.1 2470597..2471034(-) (comGD) [Bacillus velezensis strain K12]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVYTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=1063380 ACGLYC_RS11985 WP_007408322.1 2470597..2471034(-) (comGD) [Bacillus velezensis strain K12]
TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTACACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTCCAAAAAGATA
TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCCTTTGATTCGCTTCACATTACACTTGTGACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATCACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	56.164	100	0.566