Detailed information NTG0106197

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AAA996_RS06135
• Genome accession: NZ_AP028606
• Coordinates: 1214232..1215185 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495912.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1209232..1220185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA996_RS06110	-	1209720..1209815 (-)	96	Protein_1210	IS630 family transposase	-
AAA996_RS06115 (TKY121773_12100)	-	1210228..1210569 (+)	342	Protein_1211	IS3 family transposase	-
AAA996_RS06120 (TKY121773_12110)	prsA	1210688..1211629 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
AAA996_RS06125 (TKY121773_12120)	-	1211696..1212409 (-)	714	WP_001812425.1	O-methyltransferase	-
AAA996_RS06130 (TKY121773_12130)	pepF	1212411..1214213 (-)	1803	WP_000244119.1	oligoendopeptidase F	Regulator
AAA996_RS06135 (TKY121773_12140)	coiA	1214232..1215185 (-)	954	WP_000495912.1	competence protein CoiA	Machinery gene
AAA996_RS06140 (TKY121773_12150)	tehB	1215258..1216118 (-)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
AAA996_RS06145 (TKY121773_12160)	smpB	1216134..1216601 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
AAA996_RS06150 (TKY121773_12170)	rnr	1216564..1218918 (-)	2355	WP_000654919.1	ribonuclease R	-
AAA996_RS06155 (TKY121773_12180)	secG	1219020..1219253 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
AAA996_RS06160	rpmG	1219293..1219442 (-)	150	WP_001810029.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38271.96 Da
• Isoelectric Point: 9.1135

>NTDB_id=106197 AAA996_RS06135 WP_000495912.1 1214232..1215185(-) (coiA) [Streptococcus pneumoniae strain Sep1]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLVNKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYKVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=106197 AAA996_RS06135 WP_000495912.1 1214232..1215185(-) (coiA) [Streptococcus pneumoniae strain Sep1]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGTCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACAAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTGTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGGCTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCATTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.901	100	0.438