Detailed information NTG1061157

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACGTGP_RS12985
• Genome accession: NZ_CP171398
• Coordinates: 2787872..2788990 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain T24
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2782872..2793990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGTGP_RS12955 (ACGTGP_12955)	-	2783701..2784549 (+)	849	WP_000336554.1	class II glutamine amidotransferase	-
ACGTGP_RS12960 (ACGTGP_12960)	-	2784802..2785257 (+)	456	WP_000782976.1	bacteriohemerythrin	-
ACGTGP_RS12965 (ACGTGP_12965)	-	2785410..2786477 (+)	1068	WP_004748097.1	hypothetical protein	-
ACGTGP_RS12970 (ACGTGP_12970)	-	2786477..2786800 (+)	324	WP_000442585.1	RnfH family protein	-
ACGTGP_RS12975 (ACGTGP_12975)	-	2786855..2787253 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
ACGTGP_RS12980 (ACGTGP_12980)	fur	2787365..2787802 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
ACGTGP_RS12985 (ACGTGP_12985)	pilU	2787872..2788990 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACGTGP_RS12990 (ACGTGP_12990)	pilT	2789018..2790055 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
ACGTGP_RS12995 (ACGTGP_12995)	-	2790182..2790874 (+)	693	WP_272264981.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=1061157 ACGTGP_RS12985 WP_000347039.1 2787872..2788990(-) (pilU) [Acinetobacter baumannii strain T24]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1061157 ACGTGP_RS12985 WP_000347039.1 2787872..2788990(-) (pilU) [Acinetobacter baumannii strain T24]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ATGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCATGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCGATTGAGATTCTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCCGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395