Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACGK9W_RS15720 Genome accession   NZ_CP171359
Coordinates   3350021..3350413 (+) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter flavimaris strain ZYH30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3345021..3355413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGK9W_RS15690 (ACGK9W_15690) - 3345319..3346332 (-) 1014 WP_008175649.1 aspartate carbamoyltransferase catalytic subunit -
  ACGK9W_RS15695 (ACGK9W_15695) pyrR 3346360..3346869 (-) 510 WP_405417456.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACGK9W_RS15700 (ACGK9W_15700) ruvX 3346877..3347299 (-) 423 WP_405417458.1 Holliday junction resolvase RuvX -
  ACGK9W_RS15705 (ACGK9W_15705) - 3347292..3347858 (-) 567 WP_039882120.1 YqgE/AlgH family protein -
  ACGK9W_RS15710 (ACGK9W_15710) - 3347855..3348721 (-) 867 WP_014578671.1 energy transducer TonB -
  ACGK9W_RS15715 (ACGK9W_15715) gshB 3348770..3349723 (-) 954 WP_405417459.1 glutathione synthase -
  ACGK9W_RS15720 (ACGK9W_15720) pilG 3350021..3350413 (+) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  ACGK9W_RS15725 (ACGK9W_15725) pilH 3350446..3350808 (+) 363 WP_011787171.1 twitching motility response regulator PilH -
  ACGK9W_RS15730 (ACGK9W_15730) - 3350829..3351374 (+) 546 WP_008172777.1 chemotaxis protein CheW -
  ACGK9W_RS15735 (ACGK9W_15735) - 3351466..3353541 (+) 2076 WP_273070353.1 methyl-accepting chemotaxis protein -
  ACGK9W_RS15740 (ACGK9W_15740) - 3353569..3354468 (+) 900 WP_039881965.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=1060870 ACGK9W_RS15720 WP_008175635.1 3350021..3350413(+) (pilG) [Marinobacter flavimaris strain ZYH30]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=1060870 ACGK9W_RS15720 WP_008175635.1 3350021..3350413(+) (pilG) [Marinobacter flavimaris strain ZYH30]
ATGGATGACAACTTCGAGAACTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCCAAGATTGCCGATTCACAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCAGTTATCATGCTCTCCAGCAAGGACGGTCTGTTCGACAAGGCCAAGGGCCGCATCGTCGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGTAAGGATGAGCTGCTTAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment