Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACF6ZU_RS09530 | Genome accession | NZ_CP171224 |
| Coordinates | 2062607..2063128 (-) | Length | 173 a.a. |
| NCBI ID | WP_046028847.1 | Uniprot ID | A0A2V2A2Z9 |
| Organism | Pseudomonas migulae strain HY-2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2057607..2068128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF6ZU_RS09515 (ACF6ZU_09515) | - | 2058303..2059301 (-) | 999 | WP_392891832.1 | GlxA family transcriptional regulator | - |
| ACF6ZU_RS09520 (ACF6ZU_09520) | - | 2059403..2059951 (+) | 549 | WP_392891834.1 | cysteine hydrolase family protein | - |
| ACF6ZU_RS09525 (ACF6ZU_09525) | - | 2060215..2062419 (+) | 2205 | WP_392891836.1 | OsmC domain/YcaO domain-containing protein | - |
| ACF6ZU_RS09530 (ACF6ZU_09530) | ssb | 2062607..2063128 (-) | 522 | WP_046028847.1 | single-stranded DNA-binding protein | Machinery gene |
| ACF6ZU_RS09535 (ACF6ZU_09535) | - | 2063138..2064535 (-) | 1398 | WP_392891839.1 | MFS transporter | - |
| ACF6ZU_RS09540 (ACF6ZU_09540) | uvrA | 2064728..2067562 (+) | 2835 | WP_392891841.1 | excinuclease ABC subunit UvrA | - |
| ACF6ZU_RS09545 (ACF6ZU_09545) | bfr | 2067628..2068092 (-) | 465 | WP_392891843.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19171.31 Da Isoelectric Point: 5.9314
>NTDB_id=1060539 ACF6ZU_RS09530 WP_046028847.1 2062607..2063128(-) (ssb) [Pseudomonas migulae strain HY-2]
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQSAPAPRQQAPRPQQSAPQQSRPAPQQAAPQP
APDFDSFDDDIPF
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQSAPAPRQQAPRPQQSAPQQSRPAPQQAAPQP
APDFDSFDDDIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=1060539 ACF6ZU_RS09530 WP_046028847.1 2062607..2063128(-) (ssb) [Pseudomonas migulae strain HY-2]
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCGACCAGCGAACAGTGGACCGACAAGCAAACCGGTCAGAAGGTCGAGAAGACCGAAT
GGCACCGTGTATCGATGTTCGGCAAGGTGGCGGAAATCGCCGGCGAATACTTGCGTAAAGGTTCGCAGGTCTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATCGTGGTCGACATGCAAGGCAC
CATGCAGCTGCTGGGTGGCCGTCCACAACAGGGCGACCAACAAGGCGGGGGCAATAACTACCAGCAGTCCGCCCCGGCGC
CACGTCAACAGGCTCCGCGTCCGCAGCAGTCGGCTCCGCAACAGTCGCGCCCGGCTCCACAGCAGGCCGCCCCGCAGCCG
GCTCCGGATTTCGACAGCTTTGATGACGATATCCCGTTCTAG
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCGACCAGCGAACAGTGGACCGACAAGCAAACCGGTCAGAAGGTCGAGAAGACCGAAT
GGCACCGTGTATCGATGTTCGGCAAGGTGGCGGAAATCGCCGGCGAATACTTGCGTAAAGGTTCGCAGGTCTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATCGTGGTCGACATGCAAGGCAC
CATGCAGCTGCTGGGTGGCCGTCCACAACAGGGCGACCAACAAGGCGGGGGCAATAACTACCAGCAGTCCGCCCCGGCGC
CACGTCAACAGGCTCCGCGTCCGCAGCAGTCGGCTCCGCAACAGTCGCGCCCGGCTCCACAGCAGGCCGCCCCGCAGCCG
GCTCCGGATTTCGACAGCTTTGATGACGATATCCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.692 |
100 |
0.607 |
| ssb | Glaesserella parasuis strain SC1401 |
48.901 |
100 |
0.514 |
| ssb | Neisseria meningitidis MC58 |
46.667 |
100 |
0.486 |
| ssb | Neisseria gonorrhoeae MS11 |
46.667 |
100 |
0.486 |