Detailed information NTG0106042

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AAA980_RS04950
• Genome accession: NZ_AP028604
• Coordinates: 947338..948291 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495910.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Pne3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 942338..953291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA980_RS04925	rpmG	943081..943230 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
AAA980_RS04930 (TKY182805_09750)	secG	943270..943503 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
AAA980_RS04935 (TKY182805_09760)	rnr	943605..945959 (+)	2355	WP_000654893.1	ribonuclease R	-
AAA980_RS04940 (TKY182805_09770)	smpB	945922..946389 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
AAA980_RS04945 (TKY182805_09780)	tehB	946405..947265 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
AAA980_RS04950 (TKY182805_09790)	coiA	947338..948291 (+)	954	WP_000495910.1	competence protein CoiA	Machinery gene
AAA980_RS04955 (TKY182805_09800)	pepF	948310..950112 (+)	1803	WP_000244133.1	oligoendopeptidase F	Regulator
AAA980_RS04960 (TKY182805_09810)	-	950114..950827 (+)	714	WP_001812425.1	O-methyltransferase	-
AAA980_RS04965 (TKY182805_09820)	prsA	950894..951835 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
AAA980_RS04970 (TKY182805_09830)	-	951954..952283 (-)	330	Protein_981	IS3 family transposase	-
AAA980_RS04975	-	952706..952801 (+)	96	Protein_982	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38269.90 Da
• Isoelectric Point: 8.9763

>NTDB_id=106042 AAA980_RS04950 WP_000495910.1 947338..948291(+) (coiA) [Streptococcus pneumoniae strain Pne3]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=106042 AAA980_RS04950 WP_000495910.1 947338..948291(+) (coiA) [Streptococcus pneumoniae strain Pne3]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435