Detailed information NTG0105960

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AAA985_RS04950
• Genome accession: NZ_AP028603
• Coordinates: 947365..948318 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495910.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Pne2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 942365..953318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA985_RS04925	rpmG	943108..943257 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
AAA985_RS04930 (TKY181970_09740)	secG	943297..943530 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
AAA985_RS04935 (TKY181970_09750)	rnr	943632..945986 (+)	2355	WP_000654893.1	ribonuclease R	-
AAA985_RS04940 (TKY181970_09760)	smpB	945949..946416 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
AAA985_RS04945 (TKY181970_09770)	tehB	946432..947292 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
AAA985_RS04950 (TKY181970_09780)	coiA	947365..948318 (+)	954	WP_000495910.1	competence protein CoiA	Machinery gene
AAA985_RS04955 (TKY181970_09790)	pepF	948337..950139 (+)	1803	WP_000244133.1	oligoendopeptidase F	Regulator
AAA985_RS04960 (TKY181970_09800)	-	950141..950854 (+)	714	WP_001812425.1	O-methyltransferase	-
AAA985_RS04965 (TKY181970_09810)	prsA	950921..951862 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
AAA985_RS04970 (TKY181970_09820)	-	951981..952310 (-)	330	Protein_981	IS3 family transposase	-
AAA985_RS04975	-	952733..952828 (+)	96	Protein_982	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38269.90 Da
• Isoelectric Point: 8.9763

>NTDB_id=105960 AAA985_RS04950 WP_000495910.1 947365..948318(+) (coiA) [Streptococcus pneumoniae strain Pne2]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=105960 AAA985_RS04950 WP_000495910.1 947365..948318(+) (coiA) [Streptococcus pneumoniae strain Pne2]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435