Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFJY4_RS18515 | Genome accession | NZ_CP170500 |
| Coordinates | 3919007..3919498 (-) | Length | 163 a.a. |
| NCBI ID | WP_003281797.1 | Uniprot ID | A0A210XTT8 |
| Organism | Stutzerimonas stutzeri strain MBI-RS3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3914007..3924498
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFJY4_RS18490 (ACFJY4_18485) | - | 3914123..3915469 (-) | 1347 | WP_386413604.1 | MotA/TolQ/ExbB proton channel family protein | - |
| ACFJY4_RS18495 (ACFJY4_18490) | - | 3915466..3916251 (-) | 786 | WP_386413606.1 | DUF3450 domain-containing protein | - |
| ACFJY4_RS18500 (ACFJY4_18495) | - | 3916436..3917119 (+) | 684 | WP_095460570.1 | OmpW family protein | - |
| ACFJY4_RS18505 (ACFJY4_18500) | - | 3917190..3918119 (-) | 930 | WP_013981721.1 | NAD-dependent epimerase/dehydratase family protein | - |
| ACFJY4_RS18510 (ACFJY4_18505) | - | 3918112..3918996 (-) | 885 | WP_017244908.1 | sugar nucleotide-binding protein | - |
| ACFJY4_RS18515 (ACFJY4_18510) | ssb | 3919007..3919498 (-) | 492 | WP_003281797.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFJY4_RS18520 (ACFJY4_18515) | - | 3919671..3921038 (-) | 1368 | WP_017244909.1 | MFS transporter | - |
| ACFJY4_RS18525 (ACFJY4_18520) | uvrA | 3921170..3924007 (+) | 2838 | WP_386413611.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18314.38 Da Isoelectric Point: 5.9492
>NTDB_id=1057788 ACFJY4_RS18515 WP_003281797.1 3919007..3919498(-) (ssb) [Stutzerimonas stutzeri strain MBI-RS3]
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1057788 ACFJY4_RS18515 WP_003281797.1 3919007..3919498(-) (ssb) [Stutzerimonas stutzeri strain MBI-RS3]
ATGGCCAGAGGGGTGAACAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTGTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGTCGCCTGCAGACTCGCGAGTGGGAAAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCAGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTCTAG
ATGGCCAGAGGGGTGAACAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTGTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGTCGCCTGCAGACTCGCGAGTGGGAAAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCAGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.571 |
100 |
0.607 |
| ssb | Neisseria gonorrhoeae MS11 |
47.727 |
100 |
0.515 |
| ssb | Glaesserella parasuis strain SC1401 |
45.355 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
46.591 |
100 |
0.503 |