Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | ACFBML_RS14005 | Genome accession | NZ_CP170491 |
| Coordinates | 3056923..3057567 (+) | Length | 214 a.a. |
| NCBI ID | WP_050906941.1 | Uniprot ID | A0A8B3DJF2 |
| Organism | Vibrio harveyi strain LcV6 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3051923..3062567
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFBML_RS13990 (ACFBML_13990) | - | 3052368..3053816 (-) | 1449 | WP_005444325.1 | MSHA biogenesis protein MshI | - |
| ACFBML_RS13995 (ACFBML_13995) | csrD | 3053828..3055837 (-) | 2010 | WP_009698823.1 | RNase E specificity factor CsrD | - |
| ACFBML_RS14000 (ACFBML_14000) | ssb | 3056089..3056628 (-) | 540 | WP_005444320.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFBML_RS14005 (ACFBML_14005) | qstR | 3056923..3057567 (+) | 645 | WP_050906941.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| ACFBML_RS14010 (ACFBML_14010) | galU | 3057729..3058601 (+) | 873 | WP_005444317.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACFBML_RS14015 (ACFBML_14015) | uvrA | 3058739..3061561 (+) | 2823 | WP_009698825.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24561.40 Da Isoelectric Point: 8.7703
>NTDB_id=1057698 ACFBML_RS14005 WP_050906941.1 3056923..3057567(+) (qstR) [Vibrio harveyi strain LcV6]
MKKSAYARKLFLISMEDDAEKKVEALVKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKALVQSIKNLPLIWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYQEDSLEQVGEGLREIVNGQNWLPRNVTSQLLHYYRNVLSTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
MKKSAYARKLFLISMEDDAEKKVEALVKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKALVQSIKNLPLIWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYQEDSLEQVGEGLREIVNGQNWLPRNVTSQLLHYYRNVLSTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
Nucleotide
Download Length: 645 bp
>NTDB_id=1057698 ACFBML_RS14005 WP_050906941.1 3056923..3057567(+) (qstR) [Vibrio harveyi strain LcV6]
GTGAAAAAATCAGCTTATGCGAGAAAATTGTTTTTGATCAGTATGGAAGACGACGCAGAGAAAAAAGTCGAAGCGCTCGT
GAAATACACTGATATTGATATCCCTGTCATCTCCACACAAGCACTGATGGAAGCCAATCCAAAGCATCGCAATAAAATCC
TGTTGATTGACTTTAGTGAACATAAAGCACTCGTACAATCGATCAAAAACTTGCCTTTAATTTGGAAGAATTTTGAAACG
GTCATATTCAATGTTCCTAAACGCTTAACCACCGATGAGTTGTTGTCTTTTGGGCAACTAAAAGGCGTATTTTATCAGGA
AGACTCTCTAGAGCAGGTAGGTGAAGGTTTGAGAGAAATCGTGAATGGTCAGAACTGGTTGCCAAGAAATGTCACTAGTC
AATTGCTTCACTATTATCGCAATGTCCTCAGCACGCACACCGCCCCAGCAACCGTGGACTTAACCATCCGTGAGTTGCAA
GTTTTACGTTGTCTTCAGGCAGGAGCATCTAACAATCAAATGGCAGAAGAATTGTTCGTCAGTGAATTCACCATTAAATC
TCACCTTTATCAGATATTCAAAAAGCTCTCCGTAAAGAATCGCGTTCAAGCTATCGCTTGGGCAGACCAAAACTTGTTGT
CATAA
GTGAAAAAATCAGCTTATGCGAGAAAATTGTTTTTGATCAGTATGGAAGACGACGCAGAGAAAAAAGTCGAAGCGCTCGT
GAAATACACTGATATTGATATCCCTGTCATCTCCACACAAGCACTGATGGAAGCCAATCCAAAGCATCGCAATAAAATCC
TGTTGATTGACTTTAGTGAACATAAAGCACTCGTACAATCGATCAAAAACTTGCCTTTAATTTGGAAGAATTTTGAAACG
GTCATATTCAATGTTCCTAAACGCTTAACCACCGATGAGTTGTTGTCTTTTGGGCAACTAAAAGGCGTATTTTATCAGGA
AGACTCTCTAGAGCAGGTAGGTGAAGGTTTGAGAGAAATCGTGAATGGTCAGAACTGGTTGCCAAGAAATGTCACTAGTC
AATTGCTTCACTATTATCGCAATGTCCTCAGCACGCACACCGCCCCAGCAACCGTGGACTTAACCATCCGTGAGTTGCAA
GTTTTACGTTGTCTTCAGGCAGGAGCATCTAACAATCAAATGGCAGAAGAATTGTTCGTCAGTGAATTCACCATTAAATC
TCACCTTTATCAGATATTCAAAAAGCTCTCCGTAAAGAATCGCGTTCAAGCTATCGCTTGGGCAGACCAAAACTTGTTGT
CATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
92.991 |
100 |
0.93 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
88.785 |
100 |
0.888 |
| qstR | Vibrio cholerae strain A1552 |
52.336 |
100 |
0.523 |