Detailed information
Overview
| Name | comGF | Type | Machinery gene |
| Locus tag | ACFIOK_RS06425 | Genome accession | NZ_CP170434 |
| Coordinates | 1231265..1231762 (+) | Length | 165 a.a. |
| NCBI ID | WP_001829055.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain t315 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1226265..1236762
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOK_RS06385 | - | 1226320..1227306 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ACFIOK_RS06390 | - | 1227306..1227635 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOK_RS06395 | - | 1227632..1228255 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACFIOK_RS06400 | comGA | 1228307..1229270 (+) | 964 | Protein_1225 | competence type IV pilus ATPase ComGA | - |
| ACFIOK_RS06405 | comGB | 1229242..1230312 (+) | 1071 | WP_017804891.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOK_RS06410 | comGC | 1230326..1230637 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOK_RS06415 | comGD | 1230615..1231061 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOK_RS06420 | comGE | 1231048..1231347 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACFIOK_RS06425 | comGF | 1231265..1231762 (+) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOK_RS06430 | - | 1231859..1232005 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACFIOK_RS06435 | - | 1231995..1232519 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| ACFIOK_RS06440 | gcvT | 1232678..1233769 (+) | 1092 | WP_200654418.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACFIOK_RS06445 | gcvPA | 1233789..1235135 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| ACFIOK_RS06450 | gcvPB | 1235128..1236600 (+) | 1473 | WP_000202187.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPB | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 19183.92 Da Isoelectric Point: 10.2192
>NTDB_id=1057320 ACFIOK_RS06425 WP_001829055.1 1231265..1231762(+) (comGF) [Staphylococcus aureus strain t315]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV
Nucleotide
Download Length: 498 bp
>NTDB_id=1057320 ACFIOK_RS06425 WP_001829055.1 1231265..1231762(+) (comGF) [Staphylococcus aureus strain t315]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGF | Staphylococcus aureus N315 |
98.182 |
100 |
0.982 |
| comGF | Staphylococcus aureus MW2 |
98.182 |
100 |
0.982 |