Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACFIOK_RS06420 | Genome accession | NZ_CP170434 |
| Coordinates | 1231048..1231347 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain t315 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1226048..1236347
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOK_RS06380 | - | 1226120..1226323 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACFIOK_RS06385 | - | 1226320..1227306 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ACFIOK_RS06390 | - | 1227306..1227635 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOK_RS06395 | - | 1227632..1228255 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACFIOK_RS06400 | comGA | 1228307..1229270 (+) | 964 | Protein_1225 | competence type IV pilus ATPase ComGA | - |
| ACFIOK_RS06405 | comGB | 1229242..1230312 (+) | 1071 | WP_017804891.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOK_RS06410 | comGC | 1230326..1230637 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOK_RS06415 | comGD | 1230615..1231061 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOK_RS06420 | comGE | 1231048..1231347 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACFIOK_RS06425 | comGF | 1231265..1231762 (+) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOK_RS06430 | - | 1231859..1232005 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACFIOK_RS06435 | - | 1231995..1232519 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| ACFIOK_RS06440 | gcvT | 1232678..1233769 (+) | 1092 | WP_200654418.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACFIOK_RS06445 | gcvPA | 1233789..1235135 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1057319 ACFIOK_RS06420 WP_000844413.1 1231048..1231347(+) (comGE) [Staphylococcus aureus strain t315]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1057319 ACFIOK_RS06420 WP_000844413.1 1231048..1231347(+) (comGE) [Staphylococcus aureus strain t315]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |