Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BCU15_RS02420 | Genome accession | NZ_CP170028 |
| Coordinates | 517148..517702 (+) | Length | 184 a.a. |
| NCBI ID | WP_010434324.1 | Uniprot ID | A0A7Z1MML7 |
| Organism | Vibrio cyclitrophicus strain 10N.261.55.B9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 512148..522702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCU15_RS02405 (BCU15_02405) | uvrA | 512177..515008 (-) | 2832 | WP_016788322.1 | excinuclease ABC subunit UvrA | - |
| BCU15_RS02410 (BCU15_02410) | galU | 515192..516064 (-) | 873 | WP_004735975.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BCU15_RS02415 (BCU15_02415) | qstR | 516222..516869 (-) | 648 | WP_016767798.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| BCU15_RS02420 (BCU15_02420) | ssb | 517148..517702 (+) | 555 | WP_010434324.1 | single-stranded DNA-binding protein | Machinery gene |
| BCU15_RS02425 (BCU15_02425) | csrD | 517864..519879 (+) | 2016 | WP_016767796.1 | RNase E specificity factor CsrD | - |
| BCU15_RS02430 (BCU15_02430) | - | 519882..521324 (+) | 1443 | WP_016788321.1 | MSHA biogenesis protein MshI | - |
| BCU15_RS02435 (BCU15_02435) | pilO | 521324..521971 (+) | 648 | WP_010434330.1 | type 4a pilus biogenesis protein PilO | - |
| BCU15_RS02440 (BCU15_02440) | - | 521964..522296 (+) | 333 | WP_016788320.1 | MSHA biogenesis protein MshK | - |
Sequence
Protein
Download Length: 184 a.a. Molecular weight: 20286.42 Da Isoelectric Point: 5.2358
>NTDB_id=1054775 BCU15_RS02420 WP_010434324.1 517148..517702(+) (ssb) [Vibrio cyclitrophicus strain 10N.261.55.B9]
MASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMGNQQQGGWGQPQQPQQQQQQYSAPAQQQPKAP
QQAPQQAQPQYNEPPMDFDDDIPF
MASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMGNQQQGGWGQPQQPQQQQQQYSAPAQQQPKAP
QQAPQQAQPQYNEPPMDFDDDIPF
Nucleotide
Download Length: 555 bp
>NTDB_id=1054775 BCU15_RS02420 WP_010434324.1 517148..517702(+) (ssb) [Vibrio cyclitrophicus strain 10N.261.55.B9]
ATGGCTAGCCGTGGAGTTAACAAAGTTATATTAGTGGGTAACCTAGGTAATGACCCTGAAATTCGTTACATGCCAAATGG
CGGCGCAGTAGCGAACATTACCATTGCAACGTCAGAGTCATGGCGTGACAAAGCAACTGGCGAACAGCGTGAAAAAACAG
AATGGCACCGTGTTGCTCTGTTTGGCAAGCTGGCGGAAGTTGCTGGTGAGTACCTACGTAAAGGTTCTCAAGTTTACATT
GAAGGTCAACTTCAGACTCGTAAATGGCAAGATCAAAGCGGTCAAGATCGCTACACAACTGAAGTGGTTGTTCAAGGCTT
CAACGGTGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGCGGTGCTCCTGCTCAAGGTGGTATGGGTAACCAACAGCAAG
GTGGTTGGGGTCAACCACAGCAACCACAACAGCAGCAACAACAATACAGTGCTCCTGCTCAACAGCAGCCGAAAGCACCT
CAACAAGCTCCTCAGCAGGCTCAACCTCAATATAATGAGCCACCGATGGATTTTGATGATGACATCCCATTTTAG
ATGGCTAGCCGTGGAGTTAACAAAGTTATATTAGTGGGTAACCTAGGTAATGACCCTGAAATTCGTTACATGCCAAATGG
CGGCGCAGTAGCGAACATTACCATTGCAACGTCAGAGTCATGGCGTGACAAAGCAACTGGCGAACAGCGTGAAAAAACAG
AATGGCACCGTGTTGCTCTGTTTGGCAAGCTGGCGGAAGTTGCTGGTGAGTACCTACGTAAAGGTTCTCAAGTTTACATT
GAAGGTCAACTTCAGACTCGTAAATGGCAAGATCAAAGCGGTCAAGATCGCTACACAACTGAAGTGGTTGTTCAAGGCTT
CAACGGTGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGCGGTGCTCCTGCTCAAGGTGGTATGGGTAACCAACAGCAAG
GTGGTTGGGGTCAACCACAGCAACCACAACAGCAGCAACAACAATACAGTGCTCCTGCTCAACAGCAGCCGAAAGCACCT
CAACAAGCTCCTCAGCAGGCTCAACCTCAATATAATGAGCCACCGATGGATTTTGATGATGACATCCCATTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
81.72 |
100 |
0.826 |
| ssb | Glaesserella parasuis strain SC1401 |
57.219 |
100 |
0.582 |
| ssb | Neisseria meningitidis MC58 |
47.826 |
100 |
0.478 |
| ssb | Neisseria gonorrhoeae MS11 |
47.826 |
100 |
0.478 |