Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABUS28_RS01015 | Genome accession | NZ_CP169866 |
| Coordinates | 222947..223528 (+) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain Rp779 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 217947..228528
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS28_RS00990 | - | 218568..218921 (+) | 354 | WP_000580164.1 | DUF1304 domain-containing protein | - |
| ABUS28_RS00995 | - | 218974..219315 (+) | 342 | WP_000263323.1 | GlpM family protein | - |
| ABUS28_RS01000 | tenA | 219365..220039 (-) | 675 | WP_002059453.1 | thiaminase II | - |
| ABUS28_RS01005 | - | 220302..221384 (+) | 1083 | WP_000680210.1 | DUF475 domain-containing protein | - |
| ABUS28_RS01010 | - | 221531..222895 (+) | 1365 | WP_000980460.1 | MFS transporter | - |
| ABUS28_RS01015 | ssb | 222947..223528 (+) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| ABUS28_RS01020 | - | 223569..223892 (-) | 324 | WP_000082712.1 | AzlD domain-containing protein | - |
| ABUS28_RS01025 | - | 223889..224584 (-) | 696 | WP_002059947.1 | AzlC family ABC transporter permease | - |
| ABUS28_RS01030 | - | 224653..225201 (+) | 549 | WP_000081859.1 | helix-turn-helix domain-containing protein | - |
| ABUS28_RS01035 | - | 225507..226949 (+) | 1443 | WP_000718865.1 | amino acid permease | - |
| ABUS28_RS01040 | - | 227010..228509 (-) | 1500 | WP_002059940.1 | PLP-dependent aminotransferase family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=1053793 ABUS28_RS01015 WP_001215080.1 222947..223528(+) (ssb) [Acinetobacter baumannii strain Rp779]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=1053793 ABUS28_RS01015 WP_001215080.1 222947..223528(+) (ssb) [Acinetobacter baumannii strain Rp779]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |