Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABUS27_RS01045 | Genome accession | NZ_CP169811 |
| Coordinates | 234890..235471 (+) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain Lv371 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 229890..240471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS27_RS01020 | - | 230511..230864 (+) | 354 | WP_000580163.1 | DUF1304 domain-containing protein | - |
| ABUS27_RS01025 | - | 230917..231258 (+) | 342 | WP_000263327.1 | GlpM family protein | - |
| ABUS27_RS01030 | tenA | 231308..231982 (-) | 675 | WP_000899419.1 | thiaminase II | - |
| ABUS27_RS01035 | - | 232245..233327 (+) | 1083 | WP_000680211.1 | DUF475 domain-containing protein | - |
| ABUS27_RS01040 | - | 233474..234838 (+) | 1365 | WP_000980460.1 | MFS transporter | - |
| ABUS27_RS01045 | ssb | 234890..235471 (+) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| ABUS27_RS01050 | - | 235512..235835 (-) | 324 | WP_000082714.1 | AzlD domain-containing protein | - |
| ABUS27_RS01055 | - | 235832..236527 (-) | 696 | WP_000431600.1 | AzlC family ABC transporter permease | - |
| ABUS27_RS01060 | - | 236596..237144 (+) | 549 | WP_000081855.1 | helix-turn-helix domain-containing protein | - |
| ABUS27_RS01065 | - | 237450..238892 (+) | 1443 | WP_000718865.1 | amino acid permease | - |
| ABUS27_RS01070 | - | 238951..240450 (-) | 1500 | WP_001257162.1 | PLP-dependent aminotransferase family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=1053320 ABUS27_RS01045 WP_001215080.1 234890..235471(+) (ssb) [Acinetobacter baumannii strain Lv371]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=1053320 ABUS27_RS01045 WP_001215080.1 234890..235471(+) (ssb) [Acinetobacter baumannii strain Lv371]
ATGCGTGGTGTAAATAAGGTAATCTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGGACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTAATCTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGGACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |