Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABUS38_RS01000 | Genome accession | NZ_CP169791 |
| Coordinates | 222969..223550 (+) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain Hv770 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 217969..228550
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS38_RS00975 | - | 218590..218943 (+) | 354 | WP_000580168.1 | DUF1304 domain-containing protein | - |
| ABUS38_RS00980 | - | 218996..219337 (+) | 342 | WP_000263326.1 | GlpM family protein | - |
| ABUS38_RS00985 | tenA | 219387..220061 (-) | 675 | WP_000899418.1 | thiaminase II | - |
| ABUS38_RS00990 | - | 220324..221406 (+) | 1083 | WP_000680213.1 | DUF475 domain-containing protein | - |
| ABUS38_RS00995 | - | 221553..222917 (+) | 1365 | WP_001986480.1 | MFS transporter | - |
| ABUS38_RS01000 | ssb | 222969..223550 (+) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| ABUS38_RS01005 | - | 223591..223914 (-) | 324 | WP_000082714.1 | AzlD domain-containing protein | - |
| ABUS38_RS01010 | - | 223911..224606 (-) | 696 | WP_000431598.1 | AzlC family ABC transporter permease | - |
| ABUS38_RS01015 | - | 224675..225223 (+) | 549 | WP_000081859.1 | helix-turn-helix domain-containing protein | - |
| ABUS38_RS01020 | - | 225529..226971 (+) | 1443 | WP_000190767.1 | amino acid permease | - |
| ABUS38_RS01025 | - | 227032..228531 (-) | 1500 | WP_001257162.1 | PLP-dependent aminotransferase family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=1053055 ABUS38_RS01000 WP_001215080.1 222969..223550(+) (ssb) [Acinetobacter baumannii strain Hv770]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=1053055 ABUS38_RS01000 WP_001215080.1 222969..223550(+) (ssb) [Acinetobacter baumannii strain Hv770]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |