Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ABUS15_RS00430 Genome accession   NZ_CP169773
Coordinates   88225..89355 (+) Length   376 a.a.
NCBI ID   WP_031959491.1    Uniprot ID   A0A836YN88
Organism   Acinetobacter baumannii strain Hv431     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 83225..94355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUS15_RS00405 - 83485..83691 (-) 207 WP_000182542.1 hypothetical protein -
  ABUS15_RS00410 - 83745..85859 (-) 2115 WP_031959493.1 TonB-dependent copper receptor -
  ABUS15_RS00415 - 85932..86360 (-) 429 WP_000231981.1 DUF2946 family protein -
  ABUS15_RS00420 def 86397..86927 (-) 531 WP_001196539.1 peptide deformylase -
  ABUS15_RS00425 tsaP 87050..88204 (+) 1155 WP_000755282.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ABUS15_RS00430 dprA 88225..89355 (+) 1131 WP_031959491.1 DNA-processing protein DprA Machinery gene
  ABUS15_RS00435 - 89406..89975 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ABUS15_RS00440 - 90367..91287 (-) 921 WP_000084546.1 DMT family transporter -
  ABUS15_RS00445 - 91393..92046 (-) 654 WP_109067430.1 TetR/AcrR family transcriptional regulator -
  ABUS15_RS00450 - 92183..93397 (+) 1215 WP_000372838.1 MFS transporter -
  ABUS15_RS00455 - 93419..94183 (+) 765 WP_000786959.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41844.38 Da        Isoelectric Point: 6.4063

>NTDB_id=1052796 ABUS15_RS00430 WP_031959491.1 88225..89355(+) (dprA) [Acinetobacter baumannii strain Hv431]
MLTQLSSHQYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVIHHNVPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=1052796 ABUS15_RS00430 WP_031959491.1 88225..89355(+) (dprA) [Acinetobacter baumannii strain Hv431]
ATGCTCACTCAACTTTCTTCACACCAATACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAGGTCAAGCGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTAGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CACCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCCGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGTCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTGCC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A836YN88

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.138

100

0.981

  dprA Acinetobacter baumannii D1279779

97.872

100

0.979

  dprA Acinetobacter baylyi ADP1

70.341

100

0.713

  dprA Vibrio cholerae strain A1552

42.9

88.032

0.378


Multiple sequence alignment