Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACED82_RS02800 | Genome accession | NZ_CP169425 |
| Coordinates | 697962..698468 (-) | Length | 168 a.a. |
| NCBI ID | WP_011403299.1 | Uniprot ID | A0A840EH66 |
| Organism | Salinibacter ruber strain M31T | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 692962..703468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACED82_RS02780 (ACED82_02780) | - | 693813..694511 (+) | 699 | WP_011403295.1 | HAD family hydrolase | - |
| ACED82_RS02785 (ACED82_02785) | - | 694513..695154 (-) | 642 | WP_237701866.1 | rhomboid family intramembrane serine protease | - |
| ACED82_RS02790 (ACED82_02790) | purQ | 695294..696001 (-) | 708 | WP_011403297.1 | phosphoribosylformylglycinamidine synthase subunit PurQ | - |
| ACED82_RS02795 (ACED82_02795) | - | 696098..697633 (-) | 1536 | WP_011403298.1 | acyl-CoA dehydrogenase family protein | - |
| ACED82_RS02800 (ACED82_02800) | ssb | 697962..698468 (-) | 507 | WP_011403299.1 | single-stranded DNA-binding protein | Machinery gene |
| ACED82_RS02805 (ACED82_02805) | - | 698985..699800 (-) | 816 | WP_011403300.1 | alpha/beta fold hydrolase | - |
| ACED82_RS02810 (ACED82_02810) | - | 700302..700607 (+) | 306 | WP_011403301.1 | YtxH domain-containing protein | - |
| ACED82_RS02815 (ACED82_02815) | - | 700688..701512 (+) | 825 | WP_011403302.1 | YaaA family protein | - |
| ACED82_RS02820 (ACED82_02820) | udk | 701572..702243 (+) | 672 | WP_011403303.1 | uridine kinase | - |
| ACED82_RS02825 (ACED82_02825) | - | 702273..703043 (-) | 771 | WP_011403304.1 | type III pantothenate kinase | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18605.86 Da Isoelectric Point: 3.8502
>NTDB_id=1051403 ACED82_RS02800 WP_011403299.1 697962..698468(-) (ssb) [Salinibacter ruber strain M31T]
MARGVNKVILIGNLGDDPELRYTGSGTAVCNMSLATNETYTDSDGNEVQNTEWHDVVAWGRLGEICNEYLDKGSQVYFEG
KLQTRSWEDRDNNTRYSTEVKAQEMMFLDSNRQGGADMDGFDQTRGDESLDQTRQEQPAGSSGPQPGQQASSGGEDEDTF
EPDDDLPF
MARGVNKVILIGNLGDDPELRYTGSGTAVCNMSLATNETYTDSDGNEVQNTEWHDVVAWGRLGEICNEYLDKGSQVYFEG
KLQTRSWEDRDNNTRYSTEVKAQEMMFLDSNRQGGADMDGFDQTRGDESLDQTRQEQPAGSSGPQPGQQASSGGEDEDTF
EPDDDLPF
Nucleotide
Download Length: 507 bp
>NTDB_id=1051403 ACED82_RS02800 WP_011403299.1 697962..698468(-) (ssb) [Salinibacter ruber strain M31T]
ATGGCACGCGGAGTCAACAAGGTCATTCTCATCGGCAACCTCGGCGACGATCCCGAACTGCGGTACACCGGCAGCGGGAC
GGCTGTCTGCAACATGTCGCTCGCGACCAACGAAACCTACACCGATAGCGACGGCAATGAGGTGCAAAACACCGAGTGGC
ACGACGTCGTGGCGTGGGGGCGGCTCGGAGAGATCTGCAACGAGTACCTTGACAAGGGCTCCCAGGTCTACTTCGAGGGC
AAGCTCCAAACCCGCTCTTGGGAGGACCGCGACAACAACACGCGCTACTCGACGGAGGTGAAGGCCCAAGAGATGATGTT
CCTCGACAGCAATCGCCAGGGCGGGGCGGACATGGACGGCTTCGACCAGACCCGTGGGGACGAATCCCTGGACCAAACCC
GCCAGGAGCAGCCCGCCGGCTCTTCCGGTCCGCAGCCTGGGCAGCAGGCGTCCTCCGGGGGCGAGGACGAGGACACATTC
GAGCCGGACGATGATCTTCCGTTCTAG
ATGGCACGCGGAGTCAACAAGGTCATTCTCATCGGCAACCTCGGCGACGATCCCGAACTGCGGTACACCGGCAGCGGGAC
GGCTGTCTGCAACATGTCGCTCGCGACCAACGAAACCTACACCGATAGCGACGGCAATGAGGTGCAAAACACCGAGTGGC
ACGACGTCGTGGCGTGGGGGCGGCTCGGAGAGATCTGCAACGAGTACCTTGACAAGGGCTCCCAGGTCTACTTCGAGGGC
AAGCTCCAAACCCGCTCTTGGGAGGACCGCGACAACAACACGCGCTACTCGACGGAGGTGAAGGCCCAAGAGATGATGTT
CCTCGACAGCAATCGCCAGGGCGGGGCGGACATGGACGGCTTCGACCAGACCCGTGGGGACGAATCCCTGGACCAAACCC
GCCAGGAGCAGCCCGCCGGCTCTTCCGGTCCGCAGCCTGGGCAGCAGGCGTCCTCCGGGGGCGAGGACGAGGACACATTC
GAGCCGGACGATGATCTTCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
45.506 |
100 |
0.482 |
| ssb | Glaesserella parasuis strain SC1401 |
39.227 |
100 |
0.423 |
| ssb | Neisseria gonorrhoeae MS11 |
40.571 |
100 |
0.423 |
| ssb | Neisseria meningitidis MC58 |
37.714 |
100 |
0.393 |