Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ACEYZN_RS16985 Genome accession   NZ_CP169375
Coordinates   3609458..3610588 (+) Length   376 a.a.
NCBI ID   WP_002040490.1    Uniprot ID   A0A241ZJN0
Organism   Acinetobacter baumannii strain H3     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3604458..3615588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEYZN_RS16960 (ACEYZN_16960) - 3604718..3604924 (-) 207 WP_000182543.1 hypothetical protein -
  ACEYZN_RS16965 (ACEYZN_16965) - 3604978..3607092 (-) 2115 WP_001120669.1 TonB-dependent copper receptor -
  ACEYZN_RS16970 (ACEYZN_16970) - 3607165..3607593 (-) 429 WP_000231981.1 DUF2946 family protein -
  ACEYZN_RS16975 (ACEYZN_16975) def 3607630..3608160 (-) 531 WP_001196539.1 peptide deformylase -
  ACEYZN_RS16980 (ACEYZN_16980) tsaP 3608283..3609437 (+) 1155 WP_000755282.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACEYZN_RS16985 (ACEYZN_16985) dprA 3609458..3610588 (+) 1131 WP_002040490.1 DNA-processing protein DprA Machinery gene
  ACEYZN_RS16990 (ACEYZN_16990) - 3610639..3611208 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ACEYZN_RS16995 (ACEYZN_16995) - 3611600..3612520 (-) 921 WP_000084546.1 DMT family transporter -
  ACEYZN_RS17000 (ACEYZN_17000) - 3612626..3613276 (-) 651 WP_085943488.1 TetR/AcrR family transcriptional regulator -
  ACEYZN_RS17005 (ACEYZN_17005) - 3613413..3614627 (+) 1215 WP_000372838.1 MFS transporter -
  ACEYZN_RS17010 (ACEYZN_17010) - 3614649..3615413 (+) 765 WP_000786954.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41886.41 Da        Isoelectric Point: 6.4547

>NTDB_id=1051126 ACEYZN_RS16985 WP_002040490.1 3609458..3610588(+) (dprA) [Acinetobacter baumannii strain H3]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=1051126 ACEYZN_RS16985 WP_002040490.1 3609458..3610588(+) (dprA) [Acinetobacter baumannii strain H3]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGCGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCAGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCACAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTACTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGTCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAACTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A241ZJN0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.138

100

0.981

  dprA Acinetobacter baumannii D1279779

97.872

100

0.979

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715

  dprA Vibrio cholerae strain A1552

43.202

88.032

0.38


Multiple sequence alignment