Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilP   Type   Machinery gene
Locus tag   ACEWX4_RS13195 Genome accession   NZ_CP169369
Coordinates   2745581..2746108 (-) Length   175 a.a.
NCBI ID   WP_045795346.1    Uniprot ID   A0A7H8VHP9
Organism   Acinetobacter indicus strain AIBD14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2740581..2751108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEWX4_RS13175 (ACEWX4_13175) - 2740969..2741805 (-) 837 WP_374855086.1 hypothetical protein -
  ACEWX4_RS13180 (ACEWX4_13180) aroB 2741818..2742900 (-) 1083 WP_374855088.1 3-dehydroquinate synthase -
  ACEWX4_RS13185 (ACEWX4_13185) aroK 2742923..2743465 (-) 543 WP_075167858.1 shikimate kinase AroK -
  ACEWX4_RS13190 (ACEWX4_13190) pilQ 2743502..2745565 (-) 2064 WP_374855090.1 type IV pilus secretin PilQ Machinery gene
  ACEWX4_RS13195 (ACEWX4_13195) pilP 2745581..2746108 (-) 528 WP_045795346.1 pilus assembly protein PilP Machinery gene
  ACEWX4_RS13200 (ACEWX4_13200) pilO 2746108..2746827 (-) 720 WP_005180513.1 type 4a pilus biogenesis protein PilO Machinery gene
  ACEWX4_RS13205 (ACEWX4_13205) pilN 2746824..2747459 (-) 636 WP_005180516.1 PilN domain-containing protein Machinery gene
  ACEWX4_RS13210 (ACEWX4_13210) pilM 2747459..2748517 (-) 1059 WP_374855093.1 pilus assembly protein PilM Machinery gene

Sequence


Protein


Download         Length: 175 a.a.        Molecular weight: 19242.43 Da        Isoelectric Point: 7.1666

>NTDB_id=1051076 ACEWX4_RS13195 WP_045795346.1 2745581..2746108(-) (pilP) [Acinetobacter indicus strain AIBD14]
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=1051076 ACEWX4_RS13195 WP_045795346.1 2745581..2746108(-) (pilP) [Acinetobacter indicus strain AIBD14]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGCCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCACATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGTATGAAAGGCAGTATGCG
CGGGCAACGCGGCGAGATTCTGGCCCTGATTCAAACTCCAGATGGTGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGCCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA

Domains


Predicted by InterproScan.

(27-170)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H8VHP9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

75.429

100

0.754

  comL Acinetobacter baylyi ADP1

71.856

95.429

0.686


Multiple sequence alignment