Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | ABJR12_RS01955 | Genome accession | NZ_CP169356 |
| Coordinates | 374195..374533 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain Mh184.20180323.PV.G | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 369195..379533
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABJR12_RS01930 (ABJR12_000387) | rpsL | 369486..369860 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| ABJR12_RS01935 (ABJR12_000388) | rfaC | 369981..370940 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| ABJR12_RS01940 (ABJR12_000389) | waaF | 371008..372045 (-) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| ABJR12_RS01945 (ABJR12_000390) | - | 372155..372571 (-) | 417 | WP_020824267.1 | MliC family protein | - |
| ABJR12_RS01950 (ABJR12_000391) | - | 372631..373902 (-) | 1272 | WP_040080586.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| ABJR12_RS01955 (ABJR12_000392) | comEA/comE1 | 374195..374533 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| ABJR12_RS01960 (ABJR12_000393) | asd | 374698..375591 (+) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| ABJR12_RS01965 (ABJR12_000394) | hsdR | 375663..378014 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| ABJR12_RS01970 (ABJR12_000395) | - | 378062..379531 (+) | 1470 | WP_040080587.1 | class I SAM-dependent DNA methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=1050857 ABJR12_RS01955 WP_006251644.1 374195..374533(+) (comEA/comE1) [Mannheimia haemolytica strain Mh184.20180323.PV.G]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=1050857 ABJR12_RS01955 WP_006251644.1 374195..374533(+) (comEA/comE1) [Mannheimia haemolytica strain Mh184.20180323.PV.G]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |