Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACEY2J_RS14150 | Genome accession | NZ_CP169293 |
| Coordinates | 2832466..2832936 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934770.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NSA 739 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2804164..2838635 | 2832466..2832936 | within | 0 |
Gene organization within MGE regions
Location: 2804164..2838635
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEY2J_RS13965 (ACEY2J_13965) | - | 2804164..2804790 (-) | 627 | WP_000522384.1 | nitroreductase family protein | - |
| ACEY2J_RS13970 (ACEY2J_13970) | - | 2804987..2806240 (+) | 1254 | WP_000120307.1 | SdrH family protein | - |
| ACEY2J_RS13975 (ACEY2J_13975) | mroQ | 2806265..2807008 (-) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ACEY2J_RS13980 (ACEY2J_13980) | groES | 2807183..2807467 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| ACEY2J_RS13985 (ACEY2J_13985) | groL | 2807543..2809159 (+) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| ACEY2J_RS13990 (ACEY2J_13990) | - | 2809254..2809800 (-) | 547 | Protein_2715 | site-specific integrase | - |
| ACEY2J_RS13995 (ACEY2J_13995) | - | 2809861..2810073 (+) | 213 | WP_000128898.1 | LuxR C-terminal-related transcriptional regulator | - |
| ACEY2J_RS14000 (ACEY2J_14000) | - | 2810070..2810660 (+) | 591 | WP_001293058.1 | terminase small subunit | - |
| ACEY2J_RS14005 (ACEY2J_14005) | - | 2810979..2811415 (+) | 437 | Protein_2718 | hypothetical protein | - |
| ACEY2J_RS14010 (ACEY2J_14010) | - | 2811521..2811964 (+) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| ACEY2J_RS14015 (ACEY2J_14015) | - | 2812817..2814124 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACEY2J_RS14020 (ACEY2J_14020) | - | 2814285..2815196 (+) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| ACEY2J_RS14025 (ACEY2J_14025) | - | 2815258..2816102 (+) | 845 | Protein_2722 | class I SAM-dependent methyltransferase | - |
| ACEY2J_RS14030 (ACEY2J_14030) | - | 2816474..2817697 (-) | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| ACEY2J_RS14035 (ACEY2J_14035) | lukH | 2818132..2819187 (+) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| ACEY2J_RS14040 (ACEY2J_14040) | lukG | 2819209..2820225 (+) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| ACEY2J_RS14045 (ACEY2J_14045) | sph | 2820448..2821288 (-) | 841 | Protein_2726 | sphingomyelin phosphodiesterase | - |
| ACEY2J_RS14050 (ACEY2J_14050) | - | 2821345..2822382 (-) | 1038 | WP_000857198.1 | site-specific integrase | - |
| ACEY2J_RS14055 (ACEY2J_14055) | - | 2822555..2823094 (-) | 540 | WP_000391618.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACEY2J_RS14060 (ACEY2J_14060) | - | 2823234..2823401 (-) | 168 | WP_000705238.1 | hypothetical protein | - |
| ACEY2J_RS14065 (ACEY2J_14065) | - | 2823601..2823786 (-) | 186 | WP_001089804.1 | hypothetical protein | - |
| ACEY2J_RS14070 (ACEY2J_14070) | - | 2823773..2823928 (-) | 156 | WP_001049399.1 | hypothetical protein | - |
| ACEY2J_RS14075 (ACEY2J_14075) | - | 2823940..2824647 (-) | 708 | WP_000094093.1 | XRE family transcriptional regulator | - |
| ACEY2J_RS14080 (ACEY2J_14080) | - | 2824818..2825057 (+) | 240 | WP_000548578.1 | helix-turn-helix transcriptional regulator | - |
| ACEY2J_RS14085 (ACEY2J_14085) | - | 2825070..2825330 (+) | 261 | WP_000435341.1 | transcriptional regulator | - |
| ACEY2J_RS14090 (ACEY2J_14090) | - | 2825354..2825893 (-) | 540 | WP_000351243.1 | hypothetical protein | - |
| ACEY2J_RS14095 (ACEY2J_14095) | - | 2825950..2826702 (+) | 753 | WP_001148618.1 | phage antirepressor KilAC domain-containing protein | - |
| ACEY2J_RS14100 (ACEY2J_14100) | - | 2826719..2826913 (+) | 195 | WP_000388066.1 | hypothetical protein | - |
| ACEY2J_RS14105 (ACEY2J_14105) | - | 2826944..2827084 (+) | 141 | WP_000939496.1 | hypothetical protein | - |
| ACEY2J_RS14110 (ACEY2J_14110) | - | 2827099..2827731 (-) | 633 | WP_000275058.1 | hypothetical protein | - |
| ACEY2J_RS14115 (ACEY2J_14115) | - | 2827790..2828110 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| ACEY2J_RS14120 (ACEY2J_14120) | - | 2828107..2828268 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| ACEY2J_RS14125 (ACEY2J_14125) | - | 2828361..2828621 (+) | 261 | WP_000291489.1 | DUF1108 family protein | - |
| ACEY2J_RS14130 (ACEY2J_14130) | - | 2828630..2828893 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACEY2J_RS14135 (ACEY2J_14135) | - | 2828902..2830845 (+) | 1944 | WP_000700565.1 | AAA family ATPase | - |
| ACEY2J_RS14140 (ACEY2J_14140) | - | 2830847..2831767 (+) | 921 | WP_000138481.1 | recombinase RecT | - |
| ACEY2J_RS14145 (ACEY2J_14145) | - | 2831848..2832465 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| ACEY2J_RS14150 (ACEY2J_14150) | ssbA | 2832466..2832936 (+) | 471 | WP_000934770.1 | single-stranded DNA-binding protein | Machinery gene |
| ACEY2J_RS14155 (ACEY2J_14155) | - | 2832966..2833850 (+) | 885 | WP_216765977.1 | DnaD domain protein | - |
| ACEY2J_RS14160 (ACEY2J_14160) | - | 2833857..2834075 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACEY2J_RS14165 (ACEY2J_14165) | - | 2834084..2834488 (+) | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACEY2J_RS14170 (ACEY2J_14170) | - | 2834501..2834869 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACEY2J_RS14175 (ACEY2J_14175) | - | 2834873..2835115 (+) | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| ACEY2J_RS14180 (ACEY2J_14180) | - | 2835180..2835629 (+) | 450 | WP_000982711.1 | YopX family protein | - |
| ACEY2J_RS14185 (ACEY2J_14185) | - | 2835626..2836135 (+) | 510 | WP_001105598.1 | hypothetical protein | - |
| ACEY2J_RS14190 (ACEY2J_14190) | - | 2836132..2836542 (+) | 411 | WP_000197967.1 | hypothetical protein | - |
| ACEY2J_RS14195 (ACEY2J_14195) | - | 2836535..2837071 (+) | 537 | WP_001066444.1 | dUTPase | - |
| ACEY2J_RS14200 (ACEY2J_14200) | - | 2837108..2837314 (+) | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| ACEY2J_RS14205 (ACEY2J_14205) | rinB | 2837311..2837460 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACEY2J_RS14210 (ACEY2J_14210) | - | 2837460..2837660 (+) | 201 | WP_000265039.1 | DUF1514 family protein | - |
| ACEY2J_RS14215 (ACEY2J_14215) | - | 2837688..2838104 (+) | 417 | WP_000590126.1 | hypothetical protein | - |
| ACEY2J_RS14220 (ACEY2J_14220) | - | 2838336..2838635 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17713.63 Da Isoelectric Point: 5.2672
>NTDB_id=1050277 ACEY2J_RS14150 WP_000934770.1 2832466..2832936(+) (ssbA) [Staphylococcus aureus strain NSA 739]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1050277 ACEY2J_RS14150 WP_000934770.1 2832466..2832936(+) (ssbA) [Staphylococcus aureus strain NSA 739]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |