Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACEY2J_RS08530 | Genome accession | NZ_CP169293 |
| Coordinates | 1684035..1684538 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain NSA 739 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1662799..1688601 | 1684035..1684538 | within | 0 |
Gene organization within MGE regions
Location: 1662799..1688601
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEY2J_RS08365 (ACEY2J_08365) | - | 1662799..1663050 (-) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| ACEY2J_RS08370 (ACEY2J_08370) | - | 1663350..1663613 (+) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| ACEY2J_RS08375 (ACEY2J_08375) | - | 1663751..1664323 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| ACEY2J_RS08380 (ACEY2J_08380) | - | 1664504..1664872 (-) | 369 | WP_000849177.1 | YxeA family protein | - |
| ACEY2J_RS08385 (ACEY2J_08385) | selX | 1665241..1665852 (-) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| ACEY2J_RS08390 (ACEY2J_08390) | - | 1666058..1666759 (+) | 702 | Protein_1611 | tyrosine-type recombinase/integrase | - |
| ACEY2J_RS08395 (ACEY2J_08395) | - | 1666798..1667736 (+) | 939 | WP_001822249.1 | Abi family protein | - |
| ACEY2J_RS08400 (ACEY2J_08400) | - | 1668521..1668706 (-) | 186 | WP_001286805.1 | hypothetical protein | - |
| ACEY2J_RS08405 (ACEY2J_08405) | - | 1668708..1668818 (-) | 111 | WP_000139423.1 | hypothetical protein | - |
| ACEY2J_RS08410 (ACEY2J_08410) | - | 1668889..1669041 (-) | 153 | WP_001788502.1 | hypothetical protein | - |
| ACEY2J_RS08415 (ACEY2J_08415) | - | 1669302..1669400 (-) | 99 | Protein_1616 | hypothetical protein | - |
| ACEY2J_RS08420 (ACEY2J_08420) | - | 1669547..1669678 (-) | 132 | WP_000247644.1 | hypothetical protein | - |
| ACEY2J_RS08425 (ACEY2J_08425) | - | 1669874..1671448 (-) | 1575 | WP_374914254.1 | hypothetical protein | - |
| ACEY2J_RS08430 (ACEY2J_08430) | - | 1671435..1671926 (-) | 492 | WP_000770704.1 | hypothetical protein | - |
| ACEY2J_RS08435 (ACEY2J_08435) | - | 1672383..1672952 (-) | 570 | WP_001293075.1 | terminase small subunit | - |
| ACEY2J_RS08440 (ACEY2J_08440) | - | 1672949..1673290 (-) | 342 | WP_000358778.1 | hypothetical protein | - |
| ACEY2J_RS08445 (ACEY2J_08445) | - | 1673293..1673820 (-) | 528 | WP_000771368.1 | spore coat protein | - |
| ACEY2J_RS08450 (ACEY2J_08450) | - | 1673871..1674089 (-) | 219 | WP_000448772.1 | capsid morphogenesis B protein | - |
| ACEY2J_RS08455 (ACEY2J_08455) | - | 1674107..1674685 (-) | 579 | WP_000846283.1 | hypothetical protein | - |
| ACEY2J_RS08460 (ACEY2J_08460) | - | 1674697..1675038 (-) | 342 | WP_374914256.1 | pathogenicity island protein | - |
| ACEY2J_RS08465 (ACEY2J_08465) | - | 1675386..1676027 (-) | 642 | WP_001019289.1 | hypothetical protein | - |
| ACEY2J_RS08470 (ACEY2J_08470) | - | 1676029..1676301 (-) | 273 | WP_001149387.1 | hypothetical protein | - |
| ACEY2J_RS08475 (ACEY2J_08475) | - | 1676288..1677091 (-) | 804 | WP_000148371.1 | bifunctional DNA primase/polymerase | - |
| ACEY2J_RS08480 (ACEY2J_08480) | - | 1677262..1678875 (-) | 1614 | WP_000344763.1 | hypothetical protein | - |
| ACEY2J_RS08485 (ACEY2J_08485) | tscT | 1678927..1679244 (-) | 318 | WP_001103938.1 | type II toxin-antitoxin system toxin TscT | - |
| ACEY2J_RS08490 (ACEY2J_08490) | tscA | 1679247..1679456 (-) | 210 | WP_001058486.1 | type II toxin-antitoxin system antitoxin TscA | - |
| ACEY2J_RS08495 (ACEY2J_08495) | - | 1679449..1679595 (-) | 147 | WP_031824147.1 | hypothetical protein | - |
| ACEY2J_RS08500 (ACEY2J_08500) | - | 1679607..1679879 (-) | 273 | WP_000091734.1 | helix-turn-helix domain-containing protein | - |
| ACEY2J_RS08505 (ACEY2J_08505) | - | 1679880..1680092 (-) | 213 | WP_000794656.1 | helix-turn-helix transcriptional regulator | - |
| ACEY2J_RS08510 (ACEY2J_08510) | - | 1680236..1680931 (+) | 696 | WP_000668212.1 | helix-turn-helix domain-containing protein | - |
| ACEY2J_RS08515 (ACEY2J_08515) | - | 1681387..1682601 (+) | 1215 | WP_000270134.1 | site-specific integrase | - |
| ACEY2J_RS08520 (ACEY2J_08520) | - | 1682603..1683502 (+) | 900 | WP_001797289.1 | Abi family protein | - |
| ACEY2J_RS08525 (ACEY2J_08525) | rpsR | 1683741..1683983 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| ACEY2J_RS08530 (ACEY2J_08530) | ssbA | 1684035..1684538 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| ACEY2J_RS08535 (ACEY2J_08535) | rpsF | 1684559..1684855 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| ACEY2J_RS08540 (ACEY2J_08540) | - | 1685099..1685290 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| ACEY2J_RS08545 (ACEY2J_08545) | ychF | 1685376..1686473 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| ACEY2J_RS08550 (ACEY2J_08550) | - | 1686485..1686688 (-) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| ACEY2J_RS08555 (ACEY2J_08555) | - | 1686718..1687599 (-) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| ACEY2J_RS08560 (ACEY2J_08560) | - | 1687756..1688601 (-) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=1050266 ACEY2J_RS08530 WP_000934799.1 1684035..1684538(-) (ssbA) [Staphylococcus aureus strain NSA 739]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=1050266 ACEY2J_RS08530 WP_000934799.1 1684035..1684538(-) (ssbA) [Staphylococcus aureus strain NSA 739]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |