Detailed information NTG1050231

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACETK7_RS24415
• Genome accession: NZ_CP169287
• Coordinates: 5247837..5250059 (+)
• Length: 740 a.a.
• NCBI ID: WP_214377860.1
• Uniprot ID: -
• Organism: Pseudomonas hormoni strain G20-18_CNT1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5242837..5255059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACETK7_RS24395 (ACETK7_24395)	-	5243058..5243990 (+)	933	WP_214377866.1	ABC transporter ATP-binding protein	-
ACETK7_RS24400 (ACETK7_24400)	-	5243987..5244766 (+)	780	WP_214377864.1	ABC transporter permease	-
ACETK7_RS24405 (ACETK7_24405)	-	5245293..5246561 (+)	1269	WP_214378268.1	IS110 family transposase	-
ACETK7_RS24410 (ACETK7_24410)	-	5247183..5247701 (-)	519	WP_214377862.1	DUF2062 domain-containing protein	-
ACETK7_RS24415 (ACETK7_24415)	comA	5247837..5250059 (+)	2223	WP_214377860.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACETK7_RS24420 (ACETK7_24420)	exbB	5250158..5250796 (+)	639	WP_214377858.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACETK7_RS24425 (ACETK7_24425)	-	5250793..5251224 (+)	432	WP_214377856.1	biopolymer transporter ExbD	-
ACETK7_RS24430 (ACETK7_24430)	lpxK	5251224..5252234 (+)	1011	WP_214377855.1	tetraacyldisaccharide 4'-kinase	-
ACETK7_RS24435 (ACETK7_24435)	-	5252258..5252443 (+)	186	WP_007945752.1	Trm112 family protein	-
ACETK7_RS24440 (ACETK7_24440)	kdsB	5252440..5253204 (+)	765	WP_214377853.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACETK7_RS24445 (ACETK7_24445)	-	5253204..5253668 (+)	465	WP_214377851.1	low molecular weight protein-tyrosine-phosphatase	-
ACETK7_RS24450 (ACETK7_24450)	murB	5253665..5254684 (+)	1020	WP_214377849.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 81148.31 Da
• Isoelectric Point: 10.1797

>NTDB_id=1050231 ACETK7_RS24415 WP_214377860.1 5247837..5250059(+) (comA) [Pseudomonas hormoni strain G20-18_CNT1]
MRTGMMALALGLLALRFLPVLPPVWLWLVLPVMGLMALPFRTYPLAFFLFGFSWAGANAQWALDDRLSANLDGETRWVEG
RVTGLPQNNDGVVRFELTDARSRQAKVPSLMRLAWYDGPPVNSGERWRLAVKLKRPAGLLNPHAFDYDAWLLAQRIGATG
TVKDGQRLAEARWAWRDGIRQRLQAVDAQGRTGALTALVLGDGAGLSREDWQVLQDTGTVHLLVISGQHVGLLAGVVYLL
IAGLARYGMWPNRLPWLPWACGLAFAAALGYGLLAGFEVPVRRACVMIGLVLLWRLRFRHLGAWWPLLLALNAVLLLDPL
ASLQPGFWLSFAAVAVLIFTFGGRLGPWRWWQTWTRAQWLIAIGLGPLLLVLGLPISLSGPVANLLAVPWISLLVLPPAL
LGTLLLPLPYVGEGLLWLAGGLIDWLFKGLGLMAGQLPAWVPVAIPLCTWALGTLGAFLLLMPRGVPLRPLGWPLLLLLV
FPPRPLLPEGIAEVWQLDVGQGLAILVRTRHHTLLYDAGPRFGDFDLGERVVLPTLRKLGVGGLDLMLLSHADADHAGGA
RAVAHGLPVTRVLSGDPEALPVELHAEACESGRQWTWDDVRFQLWQWPSASDSNQKSCVLQIEANGERLLLTGDIDSAAE
RALLDSPLAVPTDWLQAPHHGSRSSSSMALLAALQPKAVLISRGNGNSFGHPHPTVMARYIKRGMAIHDSVEQGAIRLQL
GRFKPASTMRQERRFWRSMP

Nucleotide

• Length: 2223 bp

>NTDB_id=1050231 ACETK7_RS24415 WP_214377860.1 5247837..5250059(+) (comA) [Pseudomonas hormoni strain G20-18_CNT1]
ATGCGCACAGGGATGATGGCGCTGGCGTTGGGCCTGCTGGCCCTGCGTTTTTTGCCGGTATTACCGCCGGTCTGGTTATG
GCTGGTGTTGCCCGTAATGGGATTGATGGCACTGCCGTTCCGCACGTATCCATTGGCGTTCTTTCTGTTCGGCTTCAGTT
GGGCGGGCGCGAATGCACAGTGGGCGCTGGACGATCGTTTGTCGGCGAATCTCGATGGTGAAACGCGCTGGGTCGAAGGC
CGGGTGACGGGATTGCCGCAGAATAATGACGGGGTTGTGCGTTTCGAACTGACGGACGCCCGGTCGCGACAGGCAAAGGT
GCCGTCACTGATGCGTCTGGCCTGGTATGACGGACCACCGGTCAACAGTGGCGAACGCTGGCGGCTGGCAGTGAAACTGA
AGCGTCCTGCCGGGCTGCTCAATCCCCATGCCTTCGATTACGACGCCTGGCTGCTGGCGCAACGCATCGGTGCAACCGGA
ACCGTCAAGGATGGCCAGCGTCTTGCTGAAGCCCGGTGGGCCTGGCGCGACGGCATCCGGCAACGCTTGCAAGCCGTGGA
CGCTCAGGGGCGAACCGGTGCACTGACGGCGCTGGTGCTGGGGGATGGCGCCGGACTCAGTCGCGAGGACTGGCAGGTGT
TGCAAGACACCGGCACCGTGCACCTGTTGGTGATTTCCGGGCAGCACGTCGGTCTGCTGGCAGGCGTGGTGTATCTGCTG
ATCGCCGGGCTGGCGCGCTACGGTATGTGGCCGAATCGCTTGCCCTGGCTGCCATGGGCGTGCGGATTGGCATTCGCCGC
AGCCCTTGGTTACGGACTGCTGGCAGGATTCGAAGTGCCGGTGCGGCGAGCCTGCGTGATGATCGGGCTGGTGCTGTTGT
GGCGCCTGCGATTTCGCCACCTCGGTGCCTGGTGGCCGTTGTTGCTGGCGCTCAACGCGGTGCTGTTGCTGGATCCGCTG
GCGAGTCTGCAACCGGGTTTCTGGTTGTCCTTCGCGGCGGTGGCGGTGTTGATCTTCACCTTCGGCGGGCGCCTCGGCCC
TTGGCGATGGTGGCAAACCTGGACCCGCGCTCAATGGCTGATAGCAATCGGCCTGGGCCCGTTGCTGCTGGTGCTCGGAT
TGCCGATCAGTCTCAGCGGGCCGGTCGCCAATCTGCTGGCGGTGCCCTGGATCAGTTTGCTGGTATTGCCGCCGGCCTTG
CTGGGAACCCTGTTGTTGCCGCTGCCATATGTGGGCGAGGGGTTGCTTTGGTTGGCGGGTGGGCTGATCGACTGGCTGTT
CAAGGGCCTTGGGTTAATGGCCGGTCAATTGCCCGCGTGGGTGCCTGTGGCGATTCCATTGTGTACATGGGCGCTGGGCA
CCCTCGGCGCGTTTCTGCTGTTGATGCCGCGCGGCGTACCGCTGCGCCCATTGGGTTGGCCGCTGTTGCTGTTGCTGGTT
TTTCCTCCTCGGCCACTGTTGCCAGAGGGGATCGCCGAAGTCTGGCAACTGGATGTTGGCCAGGGGTTGGCGATCCTGGT
GCGAACCCGCCATCACACGCTGTTGTATGACGCCGGCCCGCGCTTCGGCGACTTCGACCTCGGCGAACGAGTGGTGCTGC
CCACCTTGCGCAAACTGGGCGTGGGCGGACTCGACCTGATGTTGCTCAGCCACGCCGACGCCGATCACGCCGGCGGTGCG
CGAGCGGTTGCCCATGGTTTGCCGGTGACGCGAGTGCTCAGCGGCGATCCCGAGGCGCTACCCGTCGAACTGCACGCCGA
GGCCTGCGAGAGTGGCCGGCAATGGACTTGGGACGATGTGAGGTTTCAGCTCTGGCAATGGCCTTCCGCCTCGGACAGCA
ATCAAAAATCCTGCGTCCTGCAGATCGAAGCCAATGGCGAGCGCTTGCTGCTGACGGGTGATATTGACAGCGCTGCCGAA
CGAGCCCTGCTCGACAGTCCGCTGGCCGTGCCCACTGACTGGTTGCAGGCGCCGCACCACGGCAGCCGCAGTTCGTCGTC
AATGGCGCTGCTCGCCGCGTTGCAGCCCAAAGCGGTGCTGATCTCGCGCGGCAACGGCAATTCCTTCGGCCACCCGCATC
CCACCGTCATGGCTCGCTATATAAAGCGCGGCATGGCGATCCATGACAGCGTCGAGCAGGGCGCCATTCGTCTGCAGCTC
GGACGCTTCAAGCCAGCGTCGACGATGCGTCAGGAACGGCGTTTCTGGCGTTCCATGCCATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

• Competence protein (Competence) (198-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	64.106	96.757	0.62
comA	Ralstonia pseudosolanacearum GMI1000	33.728	100	0.385