Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACEWY2_RS12785 | Genome accession | NZ_CP169267 |
| Coordinates | 2524265..2524768 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain CBC240 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2503702..2528831 | 2524265..2524768 | within | 0 |
Gene organization within MGE regions
Location: 2503702..2528831
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEWY2_RS12625 (ACEWY2_12625) | - | 2503702..2503953 (-) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| ACEWY2_RS12630 (ACEWY2_12630) | - | 2504253..2504516 (+) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| ACEWY2_RS12635 (ACEWY2_12635) | - | 2504654..2505226 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| ACEWY2_RS12640 (ACEWY2_12640) | - | 2505407..2505775 (-) | 369 | WP_000849177.1 | YxeA family protein | - |
| ACEWY2_RS12645 (ACEWY2_12645) | selX | 2506144..2506755 (-) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| ACEWY2_RS12650 (ACEWY2_12650) | - | 2506961..2507662 (+) | 702 | Protein_2446 | tyrosine-type recombinase/integrase | - |
| ACEWY2_RS12655 (ACEWY2_12655) | - | 2507701..2508639 (+) | 939 | WP_001822249.1 | Abi family protein | - |
| ACEWY2_RS12660 (ACEWY2_12660) | - | 2509179..2509622 (-) | 444 | WP_000022885.1 | GNAT family N-acetyltransferase | - |
| ACEWY2_RS12665 (ACEWY2_12665) | - | 2509741..2510067 (-) | 327 | WP_000679756.1 | DUF1433 domain-containing protein | - |
| ACEWY2_RS12670 (ACEWY2_12670) | - | 2510160..2511371 (+) | 1212 | WP_374150754.1 | hypothetical protein | - |
| ACEWY2_RS12675 (ACEWY2_12675) | - | 2511373..2511762 (+) | 390 | WP_000362902.1 | hypothetical protein | - |
| ACEWY2_RS12680 (ACEWY2_12680) | - | 2511879..2512238 (+) | 360 | WP_000935290.1 | hypothetical protein | - |
| ACEWY2_RS12685 (ACEWY2_12685) | - | 2512313..2512882 (-) | 570 | WP_159343919.1 | terminase small subunit | - |
| ACEWY2_RS12690 (ACEWY2_12690) | - | 2512879..2513091 (-) | 213 | WP_078065371.1 | pathogenicity island family protein | - |
| ACEWY2_RS12695 (ACEWY2_12695) | - | 2513223..2513750 (-) | 528 | WP_000771356.1 | spore coat protein | - |
| ACEWY2_RS12700 (ACEWY2_12700) | - | 2513801..2514019 (-) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| ACEWY2_RS12705 (ACEWY2_12705) | - | 2514037..2514615 (-) | 579 | WP_000846292.1 | hypothetical protein | - |
| ACEWY2_RS12710 (ACEWY2_12710) | - | 2514627..2514968 (-) | 342 | WP_001161659.1 | hypothetical protein | - |
| ACEWY2_RS12715 (ACEWY2_12715) | - | 2515315..2515956 (-) | 642 | WP_048665662.1 | pathogenicity island protein | - |
| ACEWY2_RS12720 (ACEWY2_12720) | - | 2515958..2516230 (-) | 273 | WP_001149389.1 | hypothetical protein | - |
| ACEWY2_RS12725 (ACEWY2_12725) | - | 2516217..2517020 (-) | 804 | WP_000148373.1 | bifunctional DNA primase/polymerase | - |
| ACEWY2_RS12730 (ACEWY2_12730) | - | 2517196..2518812 (-) | 1617 | WP_048665658.1 | hypothetical protein | - |
| ACEWY2_RS12735 (ACEWY2_12735) | tscT | 2518887..2519186 (-) | 300 | WP_048665656.1 | type II toxin-antitoxin system toxin TscT | - |
| ACEWY2_RS12740 (ACEWY2_12740) | - | 2519187..2519570 (-) | 384 | WP_000403843.1 | hypothetical protein | - |
| ACEWY2_RS12745 (ACEWY2_12745) | - | 2519530..2519775 (-) | 246 | WP_001171847.1 | hypothetical protein | - |
| ACEWY2_RS12750 (ACEWY2_12750) | - | 2519760..2519915 (-) | 156 | WP_000784886.1 | hypothetical protein | - |
| ACEWY2_RS12755 (ACEWY2_12755) | - | 2519927..2520199 (-) | 273 | WP_000091734.1 | helix-turn-helix domain-containing protein | - |
| ACEWY2_RS12760 (ACEWY2_12760) | - | 2520200..2520412 (-) | 213 | WP_048665654.1 | helix-turn-helix domain-containing protein | - |
| ACEWY2_RS12765 (ACEWY2_12765) | - | 2520556..2521254 (+) | 699 | WP_048665652.1 | helix-turn-helix domain-containing protein | - |
| ACEWY2_RS12770 (ACEWY2_12770) | - | 2521707..2522921 (+) | 1215 | WP_048665650.1 | tyrosine-type recombinase/integrase | - |
| ACEWY2_RS12775 (ACEWY2_12775) | - | 2522957..2523583 (+) | 627 | WP_233231932.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACEWY2_RS12780 (ACEWY2_12780) | rpsR | 2523971..2524213 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| ACEWY2_RS12785 (ACEWY2_12785) | ssbA | 2524265..2524768 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| ACEWY2_RS12790 (ACEWY2_12790) | rpsF | 2524789..2525085 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| ACEWY2_RS12795 (ACEWY2_12795) | - | 2525329..2525520 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| ACEWY2_RS12800 (ACEWY2_12800) | ychF | 2525606..2526703 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| ACEWY2_RS12805 (ACEWY2_12805) | - | 2526715..2526918 (-) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| ACEWY2_RS12810 (ACEWY2_12810) | - | 2526948..2527829 (-) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| ACEWY2_RS12815 (ACEWY2_12815) | - | 2527986..2528831 (-) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=1050178 ACEWY2_RS12785 WP_000934799.1 2524265..2524768(-) (ssbA) [Staphylococcus aureus strain CBC240]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=1050178 ACEWY2_RS12785 WP_000934799.1 2524265..2524768(-) (ssbA) [Staphylococcus aureus strain CBC240]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |