Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACEWY3_RS12780 | Genome accession | NZ_CP169265 |
| Coordinates | 2524207..2524710 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain CBC226 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2503644..2528773 | 2524207..2524710 | within | 0 |
Gene organization within MGE regions
Location: 2503644..2528773
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEWY3_RS12620 (ACEWY3_12620) | - | 2503644..2503895 (-) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| ACEWY3_RS12625 (ACEWY3_12625) | - | 2504195..2504458 (+) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| ACEWY3_RS12630 (ACEWY3_12630) | - | 2504596..2505168 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| ACEWY3_RS12635 (ACEWY3_12635) | - | 2505349..2505717 (-) | 369 | WP_000849177.1 | YxeA family protein | - |
| ACEWY3_RS12640 (ACEWY3_12640) | selX | 2506086..2506697 (-) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| ACEWY3_RS12645 (ACEWY3_12645) | - | 2506903..2507604 (+) | 702 | Protein_2445 | tyrosine-type recombinase/integrase | - |
| ACEWY3_RS12650 (ACEWY3_12650) | - | 2507643..2508581 (+) | 939 | WP_001822249.1 | Abi family protein | - |
| ACEWY3_RS12655 (ACEWY3_12655) | - | 2509121..2509564 (-) | 444 | WP_000022885.1 | GNAT family N-acetyltransferase | - |
| ACEWY3_RS12660 (ACEWY3_12660) | - | 2509683..2510009 (-) | 327 | WP_000679756.1 | DUF1433 domain-containing protein | - |
| ACEWY3_RS12665 (ACEWY3_12665) | - | 2510102..2511313 (+) | 1212 | WP_374150754.1 | hypothetical protein | - |
| ACEWY3_RS12670 (ACEWY3_12670) | - | 2511315..2511704 (+) | 390 | WP_000362902.1 | hypothetical protein | - |
| ACEWY3_RS12675 (ACEWY3_12675) | - | 2511821..2512180 (+) | 360 | WP_000935290.1 | hypothetical protein | - |
| ACEWY3_RS12680 (ACEWY3_12680) | - | 2512255..2512824 (-) | 570 | WP_159343919.1 | terminase small subunit | - |
| ACEWY3_RS12685 (ACEWY3_12685) | - | 2512821..2513033 (-) | 213 | WP_078065371.1 | pathogenicity island family protein | - |
| ACEWY3_RS12690 (ACEWY3_12690) | - | 2513165..2513692 (-) | 528 | WP_000771356.1 | spore coat protein | - |
| ACEWY3_RS12695 (ACEWY3_12695) | - | 2513743..2513961 (-) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| ACEWY3_RS12700 (ACEWY3_12700) | - | 2513979..2514557 (-) | 579 | WP_000846292.1 | hypothetical protein | - |
| ACEWY3_RS12705 (ACEWY3_12705) | - | 2514569..2514910 (-) | 342 | WP_001161659.1 | hypothetical protein | - |
| ACEWY3_RS12710 (ACEWY3_12710) | - | 2515257..2515898 (-) | 642 | WP_048665662.1 | pathogenicity island protein | - |
| ACEWY3_RS12715 (ACEWY3_12715) | - | 2515900..2516172 (-) | 273 | WP_001149389.1 | hypothetical protein | - |
| ACEWY3_RS12720 (ACEWY3_12720) | - | 2516159..2516962 (-) | 804 | WP_000148373.1 | bifunctional DNA primase/polymerase | - |
| ACEWY3_RS12725 (ACEWY3_12725) | - | 2517138..2518754 (-) | 1617 | WP_048665658.1 | hypothetical protein | - |
| ACEWY3_RS12730 (ACEWY3_12730) | tscT | 2518829..2519128 (-) | 300 | WP_374150755.1 | type II toxin-antitoxin system toxin TscT | - |
| ACEWY3_RS12735 (ACEWY3_12735) | - | 2519129..2519512 (-) | 384 | WP_000403843.1 | hypothetical protein | - |
| ACEWY3_RS12740 (ACEWY3_12740) | - | 2519472..2519717 (-) | 246 | WP_001171847.1 | hypothetical protein | - |
| ACEWY3_RS12745 (ACEWY3_12745) | - | 2519702..2519857 (-) | 156 | WP_000784886.1 | hypothetical protein | - |
| ACEWY3_RS12750 (ACEWY3_12750) | - | 2519869..2520141 (-) | 273 | WP_000091734.1 | helix-turn-helix domain-containing protein | - |
| ACEWY3_RS12755 (ACEWY3_12755) | - | 2520142..2520354 (-) | 213 | WP_048665654.1 | helix-turn-helix domain-containing protein | - |
| ACEWY3_RS12760 (ACEWY3_12760) | - | 2520498..2521196 (+) | 699 | WP_048665652.1 | helix-turn-helix domain-containing protein | - |
| ACEWY3_RS12765 (ACEWY3_12765) | - | 2521649..2522863 (+) | 1215 | WP_048665650.1 | tyrosine-type recombinase/integrase | - |
| ACEWY3_RS12770 (ACEWY3_12770) | - | 2522887..2523525 (+) | 639 | WP_224757400.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACEWY3_RS12775 (ACEWY3_12775) | rpsR | 2523913..2524155 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| ACEWY3_RS12780 (ACEWY3_12780) | ssbA | 2524207..2524710 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| ACEWY3_RS12785 (ACEWY3_12785) | rpsF | 2524731..2525027 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| ACEWY3_RS12790 (ACEWY3_12790) | - | 2525271..2525462 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| ACEWY3_RS12795 (ACEWY3_12795) | ychF | 2525548..2526645 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| ACEWY3_RS12800 (ACEWY3_12800) | - | 2526657..2526860 (-) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| ACEWY3_RS12805 (ACEWY3_12805) | - | 2526890..2527771 (-) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| ACEWY3_RS12810 (ACEWY3_12810) | - | 2527928..2528773 (-) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=1050100 ACEWY3_RS12780 WP_000934799.1 2524207..2524710(-) (ssbA) [Staphylococcus aureus strain CBC226]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=1050100 ACEWY3_RS12780 WP_000934799.1 2524207..2524710(-) (ssbA) [Staphylococcus aureus strain CBC226]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |