Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinR   Type   Regulator
Locus tag   AAEM72_RS06690 Genome accession   NZ_CP168764
Coordinates   1282521..1282844 (-) Length   107 a.a.
NCBI ID   WP_000578878.1    Uniprot ID   A0A6L7H7A6
Organism   Bacillus anthracis strain Z03-J001     
Function   repression of rok; repression of degU; repression of spo0A (predicted from homology)   
Competence regulation

Genomic Context

Location: 1277521..1287844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEM72_RS06665 (AAEM72_06665) - 1277830..1279116 (+) 1287 WP_341392056.1 D-alanyl-D-alanine carboxypeptidase family protein -
  AAEM72_RS06670 (AAEM72_06670) sipW 1279307..1279876 (+) 570 WP_000767792.1 signal peptidase I SipW -
  AAEM72_RS06675 (AAEM72_06675) - 1279937..1280524 (+) 588 WP_000172852.1 CalY family protein -
  AAEM72_RS06680 (AAEM72_06680) - 1280659..1281465 (+) 807 WP_151909211.1 DUF4047 domain-containing protein -
  AAEM72_RS06685 (AAEM72_06685) calY 1281852..1282445 (+) 594 WP_000053708.1 biofilm matrix protein CalY -
  AAEM72_RS06690 (AAEM72_06690) sinR 1282521..1282844 (-) 324 WP_000578878.1 helix-turn-helix domain-containing protein Regulator
  AAEM72_RS06695 (AAEM72_06695) - 1282924..1283058 (-) 135 WP_000276214.1 anti-repressor SinI family protein -
  AAEM72_RS06700 (AAEM72_06700) inhA1 1283402..1285789 (+) 2388 WP_001035926.1 M6 family metalloprotease immune inhibitor InhA1 -
  AAEM72_RS06705 (AAEM72_06705) - 1285961..1287328 (+) 1368 WP_000116794.1 aldehyde dehydrogenase -

Sequence

Protein


Download         Length: 107 a.a.        Molecular weight: 12319.17 Da        Isoelectric Point: 9.6244

>NTDB_id=1045596 AAEM72_RS06690 WP_000578878.1 1282521..1282844(-) (sinR) [Bacillus anthracis strain Z03-J001]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK

Nucleotide


Download         Length: 324 bp        

>NTDB_id=1045596 AAEM72_RS06690 WP_000578878.1 1282521..1282844(-) (sinR) [Bacillus anthracis strain Z03-J001]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA

Domains

Predicted by InterproScan.

Anti-repressor SinI (SinI)

(72-99)

Helix-turn-helix (HTH_3)

(6-60)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6L7H7A6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinR Bacillus subtilis subsp. subtilis str. 168

67.89

100

0.692

Multiple sequence alignment