Detailed information NTG1044602

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ACEN9T_RS11030
• Genome accession: NZ_CP168610
• Coordinates: 495660..496541 (-)
• Length: 293 a.a.
• NCBI ID: WP_413707731.1
• Uniprot ID: -
• Organism: Ralstonia sp. Ralssp110 strain CT11-110
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 490660..501541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEN9T_RS11000 (ACEN9T_11005)	argJ	491364..492593 (+)	1230	WP_413707730.1	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	-
ACEN9T_RS11005 (ACEN9T_11010)	-	492610..493494 (+)	885	WP_092972366.1	ATP-binding protein	-
ACEN9T_RS11010 (ACEN9T_11015)	-	493484..493933 (+)	450	WP_092972981.1	NUDIX domain-containing protein	-
ACEN9T_RS11015 (ACEN9T_11020)	-	493926..494129 (-)	204	WP_092972367.1	DNA gyrase inhibitor YacG	-
ACEN9T_RS11020 (ACEN9T_11025)	zapD	494138..494896 (-)	759	WP_004633038.1	cell division protein ZapD	-
ACEN9T_RS11025 (ACEN9T_11030)	coaE	495032..495646 (-)	615	WP_092972983.1	dephospho-CoA kinase	-
ACEN9T_RS11030 (ACEN9T_11035)	pilD	495660..496541 (-)	882	WP_413707731.1	prepilin peptidase	Machinery gene
ACEN9T_RS11035 (ACEN9T_11040)	pilG	496541..497806 (-)	1266	WP_252690566.1	type II secretion system F family protein	Machinery gene
ACEN9T_RS11040 (ACEN9T_11045)	pilB	497851..499578 (-)	1728	WP_252690568.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACEN9T_RS11045 (ACEN9T_11050)	-	499838..501112 (-)	1275	WP_092972372.1	HlyC/CorC family transporter	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31636.66 Da
• Isoelectric Point: 7.0182

>NTDB_id=1044602 ACEN9T_RS11030 WP_413707731.1 495660..496541(-) (pilD) [Ralstonia sp. Ralssp110 strain CT11-110]
MPELFVIPTLAQLPAWFVIAAGALVGLLVGSFLNVVIHRLPRMIEREEANYIAELREEPLPHPDAYNLVVPRSACPSCGH
QIKAIENIPVLSWLALRGRCSACKTPISWRYPAVELVTGLLTAACLWHFGPTWVAVASAVLLWFLIAGTMIDADTQLLPD
AITQPLLWLGLGVNLFGMFAHLHDAVIGAMAGYLFLWSIYWAYKLLRGREGMGYGDFKLMAALGAWFGWQALPLLVLLSS
VVGLVFGLVRIARGATSESPFSFGPFIAGAGVIALLAGPQLLMLAGLGPLLAP

Nucleotide

• Length: 882 bp

>NTDB_id=1044602 ACEN9T_RS11030 WP_413707731.1 495660..496541(-) (pilD) [Ralstonia sp. Ralssp110 strain CT11-110]
ATGCCAGAGTTGTTTGTCATCCCCACGCTGGCGCAACTGCCGGCGTGGTTTGTGATTGCGGCCGGGGCGCTGGTGGGCTT
GCTGGTCGGCAGTTTTCTCAACGTGGTGATTCACCGCCTGCCGCGCATGATCGAGCGGGAAGAAGCCAACTACATCGCCG
AGTTGCGCGAAGAGCCGCTGCCTCACCCCGACGCATACAACCTGGTCGTGCCACGCTCCGCATGCCCGTCGTGCGGTCAC
CAGATCAAAGCGATCGAGAATATTCCCGTATTGAGCTGGCTGGCGCTGCGCGGCCGCTGCAGTGCCTGCAAGACACCGAT
TTCATGGCGCTATCCCGCAGTGGAGCTGGTCACGGGGCTGCTGACGGCGGCCTGCCTGTGGCACTTCGGCCCGACGTGGG
TGGCAGTCGCATCGGCGGTGCTGCTGTGGTTTTTGATCGCCGGCACGATGATCGACGCAGACACGCAGCTGTTGCCGGAC
GCCATCACCCAGCCGCTGCTCTGGCTCGGCCTGGGCGTGAATCTGTTCGGCATGTTCGCGCACCTGCACGACGCGGTGAT
TGGCGCGATGGCCGGCTACCTGTTCCTGTGGTCGATCTACTGGGCGTACAAGCTGCTGCGGGGCCGCGAAGGCATGGGCT
ACGGCGACTTCAAGCTGATGGCCGCACTGGGCGCGTGGTTCGGTTGGCAGGCGCTGCCGCTGCTCGTGCTGCTGTCGTCG
GTCGTGGGACTGGTGTTTGGGCTGGTGCGCATTGCGCGCGGCGCGACGAGCGAATCGCCGTTCTCGTTCGGACCGTTCAT
TGCCGGGGCCGGCGTGATCGCACTGCTGGCCGGCCCGCAGTTGCTCATGCTGGCAGGGCTCGGCCCGCTGCTTGCGCCAT
AA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (24-129)

• Type IV leader peptidase family (Peptidase_A24) (140-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	54.244	92.491	0.502
pilD	Vibrio campbellii strain DS40M4	50.181	94.539	0.474
pilD	Neisseria gonorrhoeae MS11	48.507	91.468	0.444
pilD	Acinetobacter baumannii D1279779	48.485	90.102	0.437
pilD	Acinetobacter nosocomialis M2	48.485	90.102	0.437