Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACEN8S_RS04220 Genome accession   NZ_CP168517
Coordinates   927795..928151 (+) Length   118 a.a.
NCBI ID   WP_166700483.1    Uniprot ID   -
Organism   Luteibacter sp. Lutesp34 strain CT11-34     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 922795..933151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN8S_RS04190 (ACEN8S_04190) - 923166..924092 (-) 927 WP_413625741.1 aspartate carbamoyltransferase catalytic subunit -
  ACEN8S_RS04195 (ACEN8S_04195) ruvX 924171..924590 (-) 420 WP_413625742.1 Holliday junction resolvase RuvX -
  ACEN8S_RS04200 (ACEN8S_04200) - 924604..925170 (-) 567 WP_413625743.1 YqgE/AlgH family protein -
  ACEN8S_RS04205 (ACEN8S_04205) - 925262..925582 (+) 321 WP_413625744.1 hypothetical protein -
  ACEN8S_RS04210 (ACEN8S_04210) - 925708..926568 (-) 861 WP_413625745.1 energy transducer TonB -
  ACEN8S_RS04215 (ACEN8S_04215) gshB 926565..927506 (-) 942 WP_167025387.1 glutathione synthase -
  ACEN8S_RS04220 (ACEN8S_04220) pilG 927795..928151 (+) 357 WP_166700483.1 twitching motility response regulator PilG Regulator
  ACEN8S_RS04225 (ACEN8S_04225) - 928186..928560 (+) 375 WP_167025388.1 response regulator -
  ACEN8S_RS04230 (ACEN8S_04230) - 928568..929113 (+) 546 WP_167025390.1 chemotaxis protein CheW -
  ACEN8S_RS04235 (ACEN8S_04235) - 929284..931317 (+) 2034 WP_413625746.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 13136.28 Da        Isoelectric Point: 9.0762

>NTDB_id=1044435 ACEN8S_RS04220 WP_166700483.1 927795..928151(+) (pilG) [Luteibacter sp. Lutesp34 strain CT11-34]
MVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQKPNIIFVDIMMPRLDGYQTCALIKNNAQFRGTPVIMLSSK
DGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRYAKAS

Nucleotide


Download         Length: 357 bp        

>NTDB_id=1044435 ACEN8S_RS04220 WP_166700483.1 927795..928151(+) (pilG) [Luteibacter sp. Lutesp34 strain CT11-34]
ATGGTCATCGACGATTCGAAAACCATCCGACGCACGGCCGAAACCCTGCTGAAGAAGGAAGGCTGCGACGTCCTCACCGC
CGTCGACGGTTTCGAGGCGCTGGCGAAAATATCCGACCAGAAGCCGAACATCATCTTCGTCGACATCATGATGCCTCGTC
TGGACGGCTACCAGACCTGCGCGCTCATCAAGAACAACGCCCAGTTCCGCGGAACACCGGTGATCATGCTGTCCTCGAAG
GACGGCCTGTTCGACAAGGCGCGCGGCCGCATCGTCGGTGCCGAGCAATACCTCACCAAGCCATTCACCCGCGACGAACT
CCTCGGCGCGATCCACCGGTACGCGAAGGCGAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.795

99.153

0.712
  vicR Streptococcus mutans UA159

42.342

94.068

0.398
  pilH Synechocystis sp. PCC 6803

39.823

95.763

0.381
  chiS Vibrio cholerae strain A1552

37.288

100

0.373

Multiple sequence alignment