Detailed information NTG1043333

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ACEN3H_RS16735
• Genome accession: NZ_CP168231
• Coordinates: 3591152..3592012 (+)
• Length: 286 a.a.
• NCBI ID: WP_373358132.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain 2024CK-01095
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3586152..3597012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEN3H_RS16715 (ACEN3H_16715)	secG	3586758..3587087 (-)	330	WP_002115012.1	preprotein translocase subunit SecG	-
ACEN3H_RS16720 (ACEN3H_16720)	tpiA	3587100..3587894 (-)	795	WP_368678135.1	triose-phosphate isomerase	-
ACEN3H_RS16725 (ACEN3H_16725)	pilB	3588186..3589898 (+)	1713	WP_373358131.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACEN3H_RS16730 (ACEN3H_16730)	pilC	3589926..3591152 (+)	1227	WP_057104884.1	type II secretion system F family protein	Machinery gene
ACEN3H_RS16735 (ACEN3H_16735)	pilD	3591152..3592012 (+)	861	WP_373358132.1	A24 family peptidase	Machinery gene
ACEN3H_RS16740 (ACEN3H_16740)	coaE	3592014..3592610 (+)	597	WP_062849621.1	dephospho-CoA kinase	-
ACEN3H_RS16745 (ACEN3H_16745)	-	3592607..3593521 (-)	915	WP_373358133.1	DMT family transporter	-
ACEN3H_RS16750 (ACEN3H_16750)	rlmB	3593557..3594306 (-)	750	WP_005079348.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
ACEN3H_RS16755 (ACEN3H_16755)	-	3594409..3594735 (-)	327	WP_002115102.1	pyrimidine/purine nucleoside phosphorylase	-
ACEN3H_RS16760 (ACEN3H_16760)	-	3594812..3596122 (-)	1311	WP_057104888.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32332.77 Da
• Isoelectric Point: 6.4269

>NTDB_id=1043333 ACEN3H_RS16735 WP_373358132.1 3591152..3592012(+) (pilD) [Acinetobacter lactucae strain 2024CK-01095]
MQEIIAYFIQNLTALYIAVALLSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIEYEKLTLSKPASSCPECHQP
IRWYQNIPVISWLMLRGKCGHCQYPISIRYPAVELLTMLCSLVVVMVFGPTLQMLWGLVLTWVLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITSKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=1043333 ACEN3H_RS16735 WP_373358132.1 3591152..3592012(+) (pilD) [Acinetobacter lactucae strain 2024CK-01095]
ATGCAAGAAATTATTGCTTATTTCATTCAGAACTTAACTGCACTTTATATTGCTGTTGCACTATTGAGCCTATGTATTGG
TAGTTTTTTGAATGTAGTAATTTATCGCACCCCAAGAATGATGGAGCAAGATTGGCAGCAGGAATGTCAAATGTTGCTTA
ATCCTGAGCAACCCATCATTGAGTATGAAAAACTAACATTAAGTAAACCTGCTTCATCATGTCCAGAGTGCCATCAACCC
ATCCGTTGGTATCAAAATATTCCTGTCATAAGCTGGTTGATGTTAAGAGGGAAATGCGGTCATTGCCAATATCCCATTAG
TATTCGTTATCCAGCGGTTGAACTACTCACCATGCTATGTTCATTAGTAGTCGTCATGGTTTTTGGTCCAACCCTACAAA
TGCTTTGGGGGCTAGTCCTGACTTGGGTTTTGATTGCTTTAACATTTATAGATTTTGATACTCAGCTACTACCCGACCGT
TTCACCCTACCTTTAGCTGCTCTCGGCTTAGGTATTAATACATTTAATATTTACACCTCGCCTAACTCAGCCATTTGGGG
ATATTTAATCGGCTTTTTATGCCTTTGGATTGTGTATTACTTATTTAAAGTGATTACAAGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCCGCATTGGGCGCGTGGATGGGGCCATTGATGCTGCCATTAATTGTGCTATTGTCATCTTTA
CTCGGTGCAATTATTGGCATCATTTTACTAAAATTACGTAATGATAATCAGCCCTTTGCTTTTGGGCCCTATATTGCCAT
TGCGGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	95.804	100	0.958
pilD	Acinetobacter baumannii D1279779	94.755	100	0.948
pilD	Vibrio cholerae strain A1552	52.574	95.105	0.5
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	46.565	91.608	0.427