Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ACEN3H_RS01800 | Genome accession | NZ_CP168231 |
| Coordinates | 380628..381110 (+) | Length | 160 a.a. |
| NCBI ID | WP_373358449.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae strain 2024CK-01095 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 375628..386110
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN3H_RS01790 (ACEN3H_01790) | pilX | 375942..376751 (+) | 810 | WP_373358447.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ACEN3H_RS01795 (ACEN3H_01795) | pilY1 | 376763..380617 (+) | 3855 | WP_373358448.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACEN3H_RS01800 (ACEN3H_01800) | pilY2 | 380628..381110 (+) | 483 | WP_373358449.1 | type IV pilin protein | Machinery gene |
| ACEN3H_RS01805 (ACEN3H_01805) | pilE | 381107..381532 (+) | 426 | WP_005078455.1 | type IV pilin protein | Machinery gene |
| ACEN3H_RS01810 (ACEN3H_01810) | rpsP | 381680..381931 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACEN3H_RS01815 (ACEN3H_01815) | rimM | 381951..382499 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| ACEN3H_RS01820 (ACEN3H_01820) | trmD | 382542..383297 (+) | 756 | WP_057105812.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACEN3H_RS01825 (ACEN3H_01825) | rplS | 383517..383885 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| ACEN3H_RS01830 (ACEN3H_01830) | - | 383937..384878 (-) | 942 | WP_080648732.1 | triacylglycerol lipase | - |
| ACEN3H_RS01835 (ACEN3H_01835) | - | 384994..386025 (-) | 1032 | WP_239956804.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17567.87 Da Isoelectric Point: 8.4721
>NTDB_id=1043307 ACEN3H_RS01800 WP_373358449.1 380628..381110(+) (pilY2) [Acinetobacter lactucae strain 2024CK-01095]
MNKYYILRFNQGVTLIELMVVIMIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYYILRFNQGVTLIELMVVIMIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1043307 ACEN3H_RS01800 WP_373358449.1 380628..381110(+) (pilY2) [Acinetobacter lactucae strain 2024CK-01095]
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAACTCATGGTTGTCATCATGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACAGCCTCTGCTGCCAAAGGCGAAATTCTAA
AATTGGCGGAACAGTTGGAACGGCATAAATCCAAGAACTTTACTTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAACTCATGGTTGTCATCATGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACAGCCTCTGCTGCCAAAGGCGAAATTCTAA
AATTGGCGGAACAGTTGGAACGGCATAAATCCAAGAACTTTACTTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
94.375 |
100 |
0.944 |
| comE | Acinetobacter baylyi ADP1 |
40.698 |
100 |
0.438 |