Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ACEN3N_RS20400 Genome accession   NZ_CP168228
Coordinates   4338499..4339626 (+) Length   375 a.a.
NCBI ID   WP_373350589.1    Uniprot ID   -
Organism   Acinetobacter bereziniae strain 2024CK-01176     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 4333499..4344626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3N_RS20375 (ACEN3N_20375) - 4333669..4333911 (-) 243 WP_004831945.1 DUF4199 domain-containing protein -
  ACEN3N_RS20380 (ACEN3N_20380) - 4333937..4336015 (-) 2079 WP_373350588.1 TonB-dependent copper receptor -
  ACEN3N_RS20385 (ACEN3N_20385) - 4336098..4336601 (-) 504 WP_370469256.1 DUF2946 family protein -
  ACEN3N_RS20390 (ACEN3N_20390) def 4336670..4337200 (-) 531 WP_004831951.1 peptide deformylase -
  ACEN3N_RS20395 (ACEN3N_20395) tsaP 4337324..4338475 (+) 1152 WP_004831953.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACEN3N_RS20400 (ACEN3N_20400) dprA 4338499..4339626 (+) 1128 WP_373350589.1 DNA-processing protein DprA Machinery gene
  ACEN3N_RS20405 (ACEN3N_20405) - 4339674..4340243 (+) 570 WP_005034549.1 L-threonylcarbamoyladenylate synthase -
  ACEN3N_RS20410 (ACEN3N_20410) - 4340674..4341573 (-) 900 WP_151804345.1 DMT family transporter -
  ACEN3N_RS20415 (ACEN3N_20415) - 4341730..4342374 (-) 645 WP_262540737.1 TetR/AcrR family transcriptional regulator -
  ACEN3N_RS20420 (ACEN3N_20420) - 4342515..4343759 (+) 1245 WP_004831963.1 MFS transporter -
  ACEN3N_RS20425 (ACEN3N_20425) - 4343770..4344516 (+) 747 WP_005034555.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 41961.67 Da        Isoelectric Point: 6.6125

>NTDB_id=1043292 ACEN3N_RS20400 WP_373350589.1 4338499..4339626(+) (dprA) [Acinetobacter bereziniae strain 2024CK-01176]
MLNQIPDHQLNAIQLWYLVQHSTSAFRKLESYFGSIAKAVAPESLPRWSELKIHKNHIERANVFVTAQGQSQFKICLDKT
QQHSDFILLDTDSNYPQQLLPYHNHPPILFGKGSSQNLSQPQIAIVGSRKASPHGKQVAYDFAYYLSEKGFFITSGLAQG
IDEAAHMGGLKNQRTIAVIGTGLDLVYPSQNRKLQEQILQNSGSIISEYLPETQPISRNFPYRNRIVSGLSLGVLVAEAQ
LGSGSLITAQTAAEQGKIIFAIPGHIYGEHHQGCHQLIREGAILVDHPEQIVEDLALPTQWQCTQQAETNSQPPEIPEYL
FQLYQLLDWIGQDLDTLAQKSKLNTAQLTSYLMELELLGLCIQQSGLYLRCRVSY

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=1043292 ACEN3N_RS20400 WP_373350589.1 4338499..4339626(+) (dprA) [Acinetobacter bereziniae strain 2024CK-01176]
ATGTTGAATCAAATACCCGATCATCAATTGAATGCCATTCAACTTTGGTATTTGGTTCAACACTCAACCAGTGCCTTCCG
TAAGCTAGAGAGTTATTTTGGTTCTATTGCAAAAGCGGTAGCTCCAGAAAGCTTACCCCGCTGGTCTGAACTTAAAATTC
ATAAAAATCATATCGAAAGAGCCAATGTCTTTGTAACAGCACAAGGACAATCCCAATTTAAAATATGCTTAGATAAAACC
CAACAACATAGTGATTTTATTCTATTAGATACCGATTCAAATTATCCACAACAACTGCTTCCTTATCACAACCATCCTCC
AATTTTATTTGGAAAAGGGTCTTCACAAAACTTGAGTCAACCTCAGATTGCAATTGTCGGTAGTCGAAAAGCCAGTCCAC
ATGGAAAACAAGTGGCATATGATTTTGCTTATTATTTAAGTGAAAAAGGTTTTTTTATTACCAGCGGTTTAGCGCAAGGA
ATTGATGAAGCTGCACATATGGGTGGTCTCAAAAACCAGCGAACTATTGCTGTGATTGGTACAGGGTTAGATTTAGTTTA
TCCAAGTCAAAATCGAAAGTTACAAGAGCAAATTTTACAAAATTCTGGAAGCATCATCAGTGAGTATCTTCCAGAGACTC
AGCCTATTTCACGTAATTTTCCTTATCGAAATCGTATTGTGAGCGGTTTAAGTCTAGGTGTTCTTGTCGCAGAAGCACAA
TTGGGTAGCGGCTCATTAATTACCGCTCAAACGGCGGCTGAACAAGGTAAAATTATTTTTGCCATTCCTGGGCATATCTA
TGGAGAACACCACCAAGGTTGCCATCAACTCATTCGTGAGGGTGCAATCCTTGTTGATCATCCTGAACAAATTGTGGAAG
ATTTAGCTCTACCCACCCAATGGCAATGTACACAGCAAGCTGAAACCAACTCACAGCCCCCTGAAATTCCTGAATATTTA
TTCCAACTCTACCAATTACTAGATTGGATTGGGCAAGACCTAGATACATTGGCTCAAAAATCCAAACTCAACACCGCACA
ATTAACCAGTTATTTGATGGAATTAGAACTGTTGGGACTCTGCATTCAACAATCTGGACTATACTTACGTTGCCGAGTCA
GCTATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

66.133

100

0.661

  dprA Acinetobacter baumannii D1279779

64.456

100

0.648

  dprA Acinetobacter baylyi ADP1

61.097

100

0.624


Multiple sequence alignment