Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACEN3N_RS20395 Genome accession   NZ_CP168228
Coordinates   4337324..4338475 (+) Length   383 a.a.
NCBI ID   WP_004831953.1    Uniprot ID   A0A0A8TGL6
Organism   Acinetobacter bereziniae strain 2024CK-01176     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 4332324..4343475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3N_RS20370 (ACEN3N_20370) - 4332405..4333574 (-) 1170 WP_309803552.1 hypothetical protein -
  ACEN3N_RS20375 (ACEN3N_20375) - 4333669..4333911 (-) 243 WP_004831945.1 DUF4199 domain-containing protein -
  ACEN3N_RS20380 (ACEN3N_20380) - 4333937..4336015 (-) 2079 WP_373350588.1 TonB-dependent copper receptor -
  ACEN3N_RS20385 (ACEN3N_20385) - 4336098..4336601 (-) 504 WP_370469256.1 DUF2946 family protein -
  ACEN3N_RS20390 (ACEN3N_20390) def 4336670..4337200 (-) 531 WP_004831951.1 peptide deformylase -
  ACEN3N_RS20395 (ACEN3N_20395) tsaP 4337324..4338475 (+) 1152 WP_004831953.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACEN3N_RS20400 (ACEN3N_20400) dprA 4338499..4339626 (+) 1128 WP_373350589.1 DNA-processing protein DprA Machinery gene
  ACEN3N_RS20405 (ACEN3N_20405) - 4339674..4340243 (+) 570 WP_005034549.1 L-threonylcarbamoyladenylate synthase -
  ACEN3N_RS20410 (ACEN3N_20410) - 4340674..4341573 (-) 900 WP_151804345.1 DMT family transporter -
  ACEN3N_RS20415 (ACEN3N_20415) - 4341730..4342374 (-) 645 WP_262540737.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41766.79 Da        Isoelectric Point: 9.0582

>NTDB_id=1043291 ACEN3N_RS20395 WP_004831953.1 4337324..4338475(+) (tsaP) [Acinetobacter bereziniae strain 2024CK-01176]
MKKVLTGITGFHAKGFKKQLLAVTLCLSAGFTYMEMTHASPNVNPPALKSSAPNVYVVKRGDTLWDIAGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDKLLLCTLDGRPLIGVDEGDGCDGIIRRHQGGTSLRPQVRVESLNSAISVIPLSDIQPWLEHS
IVISPESLQNIPYTIGAADNRVITGAGQTVYARGNGLVVGQRYGIYREGKPYMFLNAEGKKFNAGLELSEVASAIATAGE
NDVTTLELTKSYNAEVRKGDYVLPSYDAELPSLFYPTTTNEVSTGGKVVRVQGSIGTAAQHSVVTIDRGNLQGAKPGQVF
SIYQQGEVVRDPKTKESVKLPSQQIGTLMIFKSFDHLSYAYILESNLPIKIGAEIKPPAITDQ

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1043291 ACEN3N_RS20395 WP_004831953.1 4337324..4338475(+) (tsaP) [Acinetobacter bereziniae strain 2024CK-01176]
ATGAAAAAGGTTTTAACTGGCATAACAGGTTTTCATGCCAAGGGGTTCAAGAAACAGTTACTTGCTGTGACACTATGTTT
AAGTGCAGGATTCACTTACATGGAAATGACACATGCAAGCCCAAATGTTAATCCACCTGCACTCAAATCCAGTGCACCCA
ATGTTTATGTAGTGAAACGTGGTGATACCTTATGGGATATCGCAGGGAAATTTTTAAGTAAGCCGTGGCGTTGGCCTGAA
ATCTGGGCAAGCAATAAACATGTTAAAAATCCCCACTGGATTTATCCTGGCGATAAATTACTGTTATGTACTTTAGATGG
TCGTCCATTAATCGGCGTGGATGAAGGTGATGGTTGTGATGGTATTATTCGTCGTCATCAAGGTGGAACATCTTTACGTC
CACAAGTACGTGTAGAGTCATTAAACAGTGCAATTTCGGTGATTCCTCTATCTGATATTCAACCGTGGCTAGAACACAGC
ATTGTCATCAGTCCTGAGTCTTTACAAAATATTCCTTATACCATTGGTGCTGCTGATAATCGTGTGATTACGGGCGCTGG
TCAAACCGTATATGCACGCGGAAATGGCTTAGTGGTAGGTCAGCGTTATGGCATTTACCGCGAAGGTAAACCTTATATGT
TCCTCAATGCGGAAGGTAAAAAGTTTAATGCGGGACTGGAGTTATCTGAAGTTGCTTCAGCAATCGCAACGGCAGGTGAA
AATGATGTCACTACACTTGAATTGACCAAGAGCTACAATGCAGAAGTTCGTAAAGGTGATTATGTTCTTCCTAGCTATGA
TGCAGAACTACCGAGCTTGTTCTATCCAACCACCACTAATGAAGTGAGTACTGGTGGTAAAGTGGTGCGTGTCCAAGGTT
CGATTGGTACAGCAGCGCAACACAGTGTAGTCACTATTGATCGCGGTAACTTACAAGGTGCGAAACCTGGACAAGTATTT
AGTATTTATCAACAAGGTGAAGTTGTTCGTGATCCAAAAACCAAGGAATCGGTAAAATTACCAAGTCAGCAAATTGGTAC
ACTGATGATTTTTAAAAGCTTTGATCATCTGAGTTATGCTTATATTTTAGAAAGCAACTTACCGATTAAAATAGGTGCTG
AGATCAAACCACCTGCGATTACAGATCAGTGA

Domains


Predicted by InterproScan.

(56-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A8TGL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

63.021

100

0.632


Multiple sequence alignment