Detailed information NTG1042076

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACCK19_RS01830
• Genome accession: NZ_CP168091
• Coordinates: 404351..404854 (+)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain CUBIST-16
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 399351..409854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCK19_RS01800 (ACCK19_01800)	-	400288..401133 (+)	846	WP_001550052.1	ParB/RepB/Spo0J family partition protein	-
ACCK19_RS01805 (ACCK19_01805)	-	401290..402171 (+)	882	WP_001077602.1	mechanosensitive ion channel family protein	-
ACCK19_RS01810 (ACCK19_01810)	-	402201..402404 (+)	204	WP_000157345.1	DUF951 domain-containing protein	-
ACCK19_RS01815 (ACCK19_01815)	ychF	402416..403513 (+)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
ACCK19_RS01820 (ACCK19_01820)	-	403599..403790 (-)	192	WP_001052483.1	hypothetical protein	-
ACCK19_RS01825 (ACCK19_01825)	rpsF	404034..404330 (+)	297	WP_001261460.1	30S ribosomal protein S6	-
ACCK19_RS01830 (ACCK19_01830)	ssbA	404351..404854 (+)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
ACCK19_RS01835 (ACCK19_01835)	rpsR	404906..405148 (+)	243	WP_000897044.1	30S ribosomal protein S18	-
ACCK19_RS01840 (ACCK19_01840)	-	405377..406174 (-)	798	WP_000119675.1	type II toxin-antitoxin system PemK/MazF family toxin	-
ACCK19_RS01845 (ACCK19_01845)	-	406198..407412 (-)	1215	WP_000270128.1	site-specific integrase	-
ACCK19_RS01850 (ACCK19_01850)	-	407711..408445 (-)	735	WP_000142630.1	helix-turn-helix domain-containing protein	-
ACCK19_RS01855 (ACCK19_01855)	-	408595..408807 (+)	213	WP_001063623.1	helix-turn-helix transcriptional regulator	-
ACCK19_RS01860 (ACCK19_01860)	-	408808..409080 (+)	273	WP_001138303.1	helix-turn-helix domain-containing protein	-
ACCK19_RS01865 (ACCK19_01865)	-	409092..409238 (+)	147	WP_000784873.1	hypothetical protein	-
ACCK19_RS01870 (ACCK19_01870)	tscA	409231..409440 (+)	210	WP_001058494.1	type II toxin-antitoxin system antitoxin TscA	-
ACCK19_RS01875 (ACCK19_01875)	tscT	409443..409757 (+)	315	WP_001103949.1	type II toxin-antitoxin system toxin TscT	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=1042076 ACCK19_RS01830 WP_000934799.1 404351..404854(+) (ssbA) [Staphylococcus aureus strain CUBIST-16]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=1042076 ACCK19_RS01830 WP_000934799.1 404351..404854(+) (ssbA) [Staphylococcus aureus strain CUBIST-16]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365