Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACCK16_RS10240 | Genome accession | NZ_CP168089 |
| Coordinates | 2050156..2050626 (-) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus strain CUBIST-23 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2045156..2055626
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCK16_RS10170 (ACCK16_10170) | - | 2045355..2045771 (-) | 417 | WP_302287876.1 | transcriptional regulator | - |
| ACCK16_RS10175 (ACCK16_10175) | - | 2045799..2045999 (-) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| ACCK16_RS10180 (ACCK16_10180) | rinB | 2045999..2046148 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACCK16_RS10185 (ACCK16_10185) | - | 2046145..2046531 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| ACCK16_RS10190 (ACCK16_10190) | - | 2046528..2046734 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| ACCK16_RS10195 (ACCK16_10195) | - | 2046731..2046976 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACCK16_RS10200 (ACCK16_10200) | - | 2047013..2047549 (-) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| ACCK16_RS10205 (ACCK16_10205) | - | 2047542..2047712 (-) | 171 | WP_000714403.1 | hypothetical protein | - |
| ACCK16_RS10210 (ACCK16_10210) | - | 2047699..2047953 (-) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| ACCK16_RS10215 (ACCK16_10215) | - | 2047968..2048210 (-) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| ACCK16_RS10220 (ACCK16_10220) | - | 2048214..2048582 (-) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACCK16_RS10225 (ACCK16_10225) | - | 2048595..2048999 (-) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACCK16_RS10230 (ACCK16_10230) | - | 2049008..2049226 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| ACCK16_RS10235 (ACCK16_10235) | - | 2049233..2050126 (-) | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| ACCK16_RS10240 (ACCK16_10240) | ssbA | 2050156..2050626 (-) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| ACCK16_RS10245 (ACCK16_10245) | - | 2050627..2051244 (-) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| ACCK16_RS10250 (ACCK16_10250) | - | 2051325..2052245 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACCK16_RS10255 (ACCK16_10255) | - | 2052247..2054190 (-) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| ACCK16_RS10260 (ACCK16_10260) | - | 2054199..2054462 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACCK16_RS10265 (ACCK16_10265) | - | 2054471..2054731 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACCK16_RS10270 (ACCK16_10270) | - | 2054736..2055038 (-) | 303 | WP_302287875.1 | DUF2482 family protein | - |
| ACCK16_RS10275 (ACCK16_10275) | - | 2055133..2055294 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACCK16_RS10280 (ACCK16_10280) | - | 2055291..2055614 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1042066 ACCK16_RS10240 WP_000610648.1 2050156..2050626(-) (ssbA) [Staphylococcus aureus strain CUBIST-23]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1042066 ACCK16_RS10240 WP_000610648.1 2050156..2050626(-) (ssbA) [Staphylococcus aureus strain CUBIST-23]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |