Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACCK22_RS11835 | Genome accession | NZ_CP168085 |
| Coordinates | 2280876..2281346 (-) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus strain CUBIST-27 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2251330..2305624 | 2280876..2281346 | within | 0 |
Gene organization within MGE regions
Location: 2251330..2305624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCK22_RS11615 (ACCK22_11615) | scn | 2251330..2251680 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACCK22_RS11620 (ACCK22_11620) | - | 2252364..2252813 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACCK22_RS11625 (ACCK22_11625) | - | 2252908..2253246 (-) | 339 | Protein_2259 | SH3 domain-containing protein | - |
| ACCK22_RS11630 (ACCK22_11630) | sak | 2253893..2254384 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACCK22_RS11635 (ACCK22_11635) | - | 2254575..2255330 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACCK22_RS11640 (ACCK22_11640) | - | 2255342..2255596 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACCK22_RS11645 (ACCK22_11645) | - | 2255648..2255755 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACCK22_RS11650 (ACCK22_11650) | pepG1 | 2255808..2255942 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACCK22_RS11655 (ACCK22_11655) | - | 2256134..2256430 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACCK22_RS11660 (ACCK22_11660) | - | 2256488..2256775 (-) | 288 | WP_001040254.1 | hypothetical protein | - |
| ACCK22_RS11665 (ACCK22_11665) | - | 2256822..2256974 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACCK22_RS11670 (ACCK22_11670) | - | 2256964..2260749 (-) | 3786 | WP_372496601.1 | phage tail spike protein | - |
| ACCK22_RS11675 (ACCK22_11675) | - | 2260765..2262249 (-) | 1485 | WP_000567410.1 | phage tail domain-containing protein | - |
| ACCK22_RS11680 (ACCK22_11680) | - | 2262246..2266775 (-) | 4530 | WP_060829111.1 | phage tail tape measure protein | - |
| ACCK22_RS11685 (ACCK22_11685) | gpGT | 2266832..2266969 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACCK22_RS11690 (ACCK22_11690) | gpG | 2267020..2267370 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACCK22_RS11695 (ACCK22_11695) | - | 2267420..2267644 (-) | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| ACCK22_RS11700 (ACCK22_11700) | - | 2267686..2268330 (-) | 645 | WP_000268741.1 | major tail protein | - |
| ACCK22_RS11705 (ACCK22_11705) | - | 2268331..2268738 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACCK22_RS11710 (ACCK22_11710) | - | 2268735..2269139 (-) | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| ACCK22_RS11715 (ACCK22_11715) | - | 2269136..2269498 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACCK22_RS11720 (ACCK22_11720) | - | 2269482..2269766 (-) | 285 | WP_000150937.1 | phage head-tail adapter protein | - |
| ACCK22_RS11725 (ACCK22_11725) | - | 2269756..2270040 (-) | 285 | WP_000238240.1 | hypothetical protein | - |
| ACCK22_RS11730 (ACCK22_11730) | - | 2270060..2271205 (-) | 1146 | WP_000154569.1 | phage major capsid protein | - |
| ACCK22_RS11735 (ACCK22_11735) | - | 2271228..2271965 (-) | 738 | WP_000861912.1 | head maturation protease, ClpP-related | - |
| ACCK22_RS11740 (ACCK22_11740) | - | 2271949..2273136 (-) | 1188 | WP_000025266.1 | phage portal protein | - |
| ACCK22_RS11745 (ACCK22_11745) | - | 2273152..2274813 (-) | 1662 | WP_000625096.1 | terminase large subunit | - |
| ACCK22_RS11750 (ACCK22_11750) | - | 2274810..2275154 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACCK22_RS11755 (ACCK22_11755) | - | 2275285..2275584 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACCK22_RS11760 (ACCK22_11760) | - | 2275816..2276232 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACCK22_RS11765 (ACCK22_11765) | - | 2276260..2276460 (-) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| ACCK22_RS11770 (ACCK22_11770) | rinB | 2276460..2276609 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACCK22_RS11775 (ACCK22_11775) | - | 2276606..2276992 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| ACCK22_RS11780 (ACCK22_11780) | - | 2276989..2277195 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| ACCK22_RS11785 (ACCK22_11785) | - | 2277192..2277437 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACCK22_RS11790 (ACCK22_11790) | - | 2277474..2278010 (-) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| ACCK22_RS11795 (ACCK22_11795) | - | 2278003..2278173 (-) | 171 | WP_000714403.1 | hypothetical protein | - |
| ACCK22_RS11800 (ACCK22_11800) | - | 2278160..2278414 (-) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| ACCK22_RS11805 (ACCK22_11805) | - | 2278429..2278671 (-) | 243 | WP_001811924.1 | SAV1978 family virulence-associated passenger protein | - |
| ACCK22_RS11810 (ACCK22_11810) | - | 2278674..2278931 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACCK22_RS11815 (ACCK22_11815) | - | 2278931..2279302 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACCK22_RS11820 (ACCK22_11820) | - | 2279315..2279719 (-) | 405 | WP_064137537.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACCK22_RS11825 (ACCK22_11825) | - | 2279728..2279946 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| ACCK22_RS11830 (ACCK22_11830) | - | 2279953..2280846 (-) | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| ACCK22_RS11835 (ACCK22_11835) | ssbA | 2280876..2281346 (-) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| ACCK22_RS11840 (ACCK22_11840) | - | 2281347..2281964 (-) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| ACCK22_RS11845 (ACCK22_11845) | - | 2282045..2282965 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACCK22_RS11850 (ACCK22_11850) | - | 2282967..2284910 (-) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| ACCK22_RS11855 (ACCK22_11855) | - | 2284919..2285182 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACCK22_RS11860 (ACCK22_11860) | - | 2285191..2285451 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACCK22_RS11865 (ACCK22_11865) | - | 2285456..2285758 (-) | 303 | WP_000165374.1 | DUF2482 family protein | - |
| ACCK22_RS11870 (ACCK22_11870) | - | 2285851..2286012 (-) | 162 | WP_000066021.1 | DUF1270 family protein | - |
| ACCK22_RS11875 (ACCK22_11875) | - | 2286009..2286329 (-) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| ACCK22_RS11880 (ACCK22_11880) | - | 2286384..2286764 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACCK22_RS11885 (ACCK22_11885) | - | 2286751..2286948 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| ACCK22_RS11890 (ACCK22_11890) | - | 2286964..2287719 (-) | 756 | WP_001148342.1 | phage antirepressor KilAC domain-containing protein | - |
| ACCK22_RS11895 (ACCK22_11895) | - | 2287776..2288314 (+) | 539 | Protein_2313 | hypothetical protein | - |
| ACCK22_RS11900 (ACCK22_11900) | - | 2288338..2288598 (-) | 261 | WP_000435341.1 | transcriptional regulator | - |
| ACCK22_RS11905 (ACCK22_11905) | - | 2288611..2288853 (-) | 243 | WP_000639926.1 | DUF739 family protein | - |
| ACCK22_RS11910 (ACCK22_11910) | - | 2289017..2289733 (+) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| ACCK22_RS11915 (ACCK22_11915) | - | 2289745..2290599 (+) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| ACCK22_RS11920 (ACCK22_11920) | - | 2290673..2290819 (+) | 147 | WP_000345949.1 | hypothetical protein | - |
| ACCK22_RS11925 (ACCK22_11925) | - | 2290816..2291001 (+) | 186 | WP_000100503.1 | hypothetical protein | - |
| ACCK22_RS11930 (ACCK22_11930) | - | 2291201..2291383 (+) | 183 | WP_000705240.1 | hypothetical protein | - |
| ACCK22_RS11935 (ACCK22_11935) | - | 2291461..2292174 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACCK22_RS11940 (ACCK22_11940) | - | 2292365..2293402 (+) | 1038 | WP_000857198.1 | site-specific integrase | - |
| ACCK22_RS11945 (ACCK22_11945) | sph | 2293459..2294283 (+) | 825 | Protein_2323 | sphingomyelin phosphodiesterase | - |
| ACCK22_RS11950 (ACCK22_11950) | lukG | 2294521..2295537 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACCK22_RS11955 (ACCK22_11955) | lukH | 2295559..2296614 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACCK22_RS11960 (ACCK22_11960) | - | 2297050..2298273 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACCK22_RS11965 (ACCK22_11965) | - | 2298776..2300083 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACCK22_RS11970 (ACCK22_11970) | groL | 2300623..2302239 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACCK22_RS11975 (ACCK22_11975) | groES | 2302315..2302599 (-) | 285 | WP_031771823.1 | co-chaperone GroES | - |
| ACCK22_RS11980 (ACCK22_11980) | mroQ | 2302774..2303517 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ACCK22_RS11985 (ACCK22_11985) | - | 2303542..2304801 (-) | 1260 | WP_000120297.1 | SdrH family protein | - |
| ACCK22_RS11990 (ACCK22_11990) | - | 2304998..2305624 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1041980 ACCK22_RS11835 WP_000610648.1 2280876..2281346(-) (ssbA) [Staphylococcus aureus strain CUBIST-27]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1041980 ACCK22_RS11835 WP_000610648.1 2280876..2281346(-) (ssbA) [Staphylococcus aureus strain CUBIST-27]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |