Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACD631_RS01040 | Genome accession | NZ_CP168061 |
| Coordinates | 238340..238924 (+) | Length | 194 a.a. |
| NCBI ID | WP_039217393.1 | Uniprot ID | A0A0B3YFD5 |
| Organism | Alteromonas macleodii strain H4-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 233340..243924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACD631_RS01025 (ACD631_01025) | - | 233967..235022 (+) | 1056 | WP_252119553.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| ACD631_RS01030 (ACD631_01030) | galK | 235015..236154 (+) | 1140 | WP_039217399.1 | galactokinase | - |
| ACD631_RS01035 (ACD631_01035) | - | 236510..238072 (+) | 1563 | WP_252119554.1 | sodium/sugar symporter | - |
| ACD631_RS01040 (ACD631_01040) | ssb | 238340..238924 (+) | 585 | WP_039217393.1 | single-stranded DNA-binding protein | Machinery gene |
| ACD631_RS01045 (ACD631_01045) | - | 239133..240086 (+) | 954 | WP_252119555.1 | hypothetical protein | - |
| ACD631_RS01050 (ACD631_01050) | - | 240266..241555 (+) | 1290 | WP_252119556.1 | dienelactone hydrolase family protein | - |
| ACD631_RS01055 (ACD631_01055) | - | 241779..242846 (+) | 1068 | WP_252119557.1 | L-dopachrome tautomerase-related protein | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21156.05 Da Isoelectric Point: 4.9658
>NTDB_id=1041831 ACD631_RS01040 WP_039217393.1 238340..238924(+) (ssb) [Alteromonas macleodii strain H4-1]
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMYRRLAEIAGEYLKKGSQIYVE
GKLQTRKWQDQQGQDRYTTEIIVDQMQMLGGRGGEGGGGNGGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNSNQ
GGGYNQAPQGGNQGQPKNPPMAEPDFDFDDDIPF
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMYRRLAEIAGEYLKKGSQIYVE
GKLQTRKWQDQQGQDRYTTEIIVDQMQMLGGRGGEGGGGNGGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNSNQ
GGGYNQAPQGGNQGQPKNPPMAEPDFDFDDDIPF
Nucleotide
Download Length: 585 bp
>NTDB_id=1041831 ACD631_RS01040 WP_039217393.1 238340..238924(+) (ssb) [Alteromonas macleodii strain H4-1]
ATGGCAACGAAAGGCGTTAATAAGGTTATTCTTGTTGGAAACCTTGGCAATGATCCTGAAGTTAGATACATGCCTAACGG
AAACGCCGTTGCGAACTTAAGCCTAGCAACTAGCGAAAGCTGGAAAGACCAACAGGGTCAGGTTCAAGAGCGCACTGAGT
GGCACCGCCTTACAATGTACCGTCGCTTAGCAGAAATTGCCGGAGAGTACCTGAAAAAGGGCTCGCAAATTTATGTTGAA
GGTAAATTGCAAACGCGTAAGTGGCAAGATCAACAAGGCCAAGATAGATACACCACTGAAATTATCGTAGACCAAATGCA
AATGCTTGGTGGTCGCGGTGGTGAAGGTGGCGGCGGTAACGGTGGTTACCAACGTCCTCAAAACAACCAAGGTGGTTACA
ATCAAGCTCCAGCGCAGGGCGGCTATAACCAAGCGCCACAGCAAGGTGGTGGTCAGCAGGGCGGCTACAACTCAAACCAA
GGTGGTGGCTACAATCAAGCGCCTCAGGGTGGCAATCAAGGTCAGCCAAAGAACCCACCAATGGCTGAGCCAGATTTTGA
CTTCGACGATGACATTCCGTTCTAA
ATGGCAACGAAAGGCGTTAATAAGGTTATTCTTGTTGGAAACCTTGGCAATGATCCTGAAGTTAGATACATGCCTAACGG
AAACGCCGTTGCGAACTTAAGCCTAGCAACTAGCGAAAGCTGGAAAGACCAACAGGGTCAGGTTCAAGAGCGCACTGAGT
GGCACCGCCTTACAATGTACCGTCGCTTAGCAGAAATTGCCGGAGAGTACCTGAAAAAGGGCTCGCAAATTTATGTTGAA
GGTAAATTGCAAACGCGTAAGTGGCAAGATCAACAAGGCCAAGATAGATACACCACTGAAATTATCGTAGACCAAATGCA
AATGCTTGGTGGTCGCGGTGGTGAAGGTGGCGGCGGTAACGGTGGTTACCAACGTCCTCAAAACAACCAAGGTGGTTACA
ATCAAGCTCCAGCGCAGGGCGGCTATAACCAAGCGCCACAGCAAGGTGGTGGTCAGCAGGGCGGCTACAACTCAAACCAA
GGTGGTGGCTACAATCAAGCGCCTCAGGGTGGCAATCAAGGTCAGCCAAAGAACCCACCAATGGCTGAGCCAGATTTTGA
CTTCGACGATGACATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
56.5 |
100 |
0.582 |
| ssb | Vibrio cholerae strain A1552 |
55 |
100 |
0.567 |
| ssb | Neisseria meningitidis MC58 |
46.875 |
98.969 |
0.464 |
| ssb | Neisseria gonorrhoeae MS11 |
46.875 |
98.969 |
0.464 |