Detailed information NTG1040642

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KJP57_RS15215
• Genome accession: NZ_OX419573
• Coordinates: 2871780..2872385 (-)
• Length: 201 a.a.
• NCBI ID: WP_046381240.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6085
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2866780..2877385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP57_RS15185 (NRS6085_15165)	-	2867593..2867982 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
KJP57_RS15190 (NRS6085_15170)	yajC	2868039..2868305 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
KJP57_RS15195 (NRS6085_15175)	tgt	2868342..2869487 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
KJP57_RS15200 (NRS6085_15180)	queA	2869514..2870542 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
KJP57_RS15205 (NRS6085_15185)	yrzS	2870572..2870772 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
KJP57_RS15210 (NRS6085_15190)	ruvB	2870765..2871769 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KJP57_RS15215 (NRS6085_15195)	ruvA	2871780..2872385 (-)	606	WP_046381240.1	Holliday junction branch migration protein RuvA	Machinery gene
KJP57_RS15220 (NRS6085_15200)	bofC	2872524..2873036 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
KJP57_RS15225 (NRS6085_15205)	csbX	2873084..2874391 (-)	1308	WP_046381241.1	MFS transporter	-
KJP57_RS15230 (NRS6085_15210)	iolG	2874462..2875487 (-)	1026	WP_046381242.1	inositol 2-dehydrogenase	-
KJP57_RS15235 (NRS6085_15215)	yrzF	2875725..2876372 (+)	648	WP_003246159.1	phosphotransferase	-
KJP57_RS15240 (NRS6085_15220)	-	2876418..2876540 (-)	123	WP_003229707.1	hypothetical protein	-
KJP57_RS15245 (NRS6085_15225)	-	2876741..2877067 (+)	327	WP_175405008.1	DUF5412 family protein	-
KJP57_RS15250	-	2877074..2877214 (+)	141	WP_017696343.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22597.12 Da
• Isoelectric Point: 5.1805

>NTDB_id=1040642 KJP57_RS15215 WP_046381240.1 2871780..2872385(-) (ruvA) [Bacillus subtilis isolate NRS6085]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFIKLLNVTGIGP
KGALAILGSGDPGAVIQAIEDEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=1040642 KJP57_RS15215 WP_046381240.1 2871780..2872385(-) (ruvA) [Bacillus subtilis isolate NRS6085]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTCATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTATAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAGATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• Helix-hairpin-helix domain (HHH_5) (69-126)

• RuvA N terminal domain (RuvA_N) (1-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	99.005	100	0.99
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408