Detailed information NTG1039849

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACCQ04_RS15555
• Genome accession: NZ_CP167851
• Coordinates: 3655861..3657255 (+)
• Length: 464 a.a.
• NCBI ID: WP_051634076.1
• Uniprot ID: A0AAP4NHR5
• Organism: Xanthomonas sp. NCPPB 2866
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3650861..3662255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCQ04_RS15540 (ACCQ04_15540)	sucD	3651754..3652629 (-)	876	WP_011038208.1	succinate--CoA ligase subunit alpha	-
ACCQ04_RS15545 (ACCQ04_15545)	sucC	3652654..3653823 (-)	1170	WP_039519379.1	ADP-forming succinate--CoA ligase subunit beta	-
ACCQ04_RS15550 (ACCQ04_15550)	-	3654055..3655668 (+)	1614	WP_016901263.1	PAS domain-containing sensor histidine kinase	-
ACCQ04_RS15555 (ACCQ04_15555)	pilR	3655861..3657255 (+)	1395	WP_051634076.1	sigma-54 dependent transcriptional regulator	Regulator
ACCQ04_RS15560 (ACCQ04_15560)	pilB	3657469..3659205 (-)	1737	WP_226427346.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACCQ04_RS15565 (ACCQ04_15565)	-	3659461..3659895 (-)	435	WP_104646205.1	pilin	-
ACCQ04_RS15570 (ACCQ04_15570)	pilC	3660247..3661503 (+)	1257	WP_226427347.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 50118.51 Da
• Isoelectric Point: 6.5112

>NTDB_id=1039849 ACCQ04_RS15555 WP_051634076.1 3655861..3657255(+) (pilR) [Xanthomonas sp. NCPPB 2866]
MNEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPDGNGIELVTEIAKHYPQTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNRDRPAPPAPPPEQASRLLGDSGAMEGLRATIGKVAR
SQAPVYIVGESGVGKELVARTIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASSESLVDVRILSATHKNLGDLVSDGRFRHDLYYRINVIELRVPPLRERGGDLP
QLAAAIIARLAHSHGRPIPLLTQSALDALDQYGFPGNVRELENILERALALAEDDQISATDLRLPAHGGHRLAATPGSAA
VEPREAVVDIDPASAALPSYIEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1395 bp

>NTDB_id=1039849 ACCQ04_RS15555 WP_051634076.1 3655861..3657255(+) (pilR) [Xanthomonas sp. NCPPB 2866]
ATGAACGAACCGAAAAGTGCCTTGGTTGTCGATGACGAGCGTGACATTCGCGAACTGCTTGTTCTCACCCTGGGCCGGAT
GGGCCTGCGCATCAGCACCGCCGCCAACCTGGCCGAAGCACGCGAGCTGCTGGCCAACAATCCCTACGACCTGTGCCTGA
CCGACATGCGGTTGCCCGACGGCAACGGCATTGAACTGGTTACCGAAATCGCCAAGCATTACCCGCAGACCCCGGTGGCG
ATGATCACCGCGTTCGGCAGCATGGACCTGGCGGTGGAAGCCTTGAAGGCCGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGATATCAGCGTGCTGCGCGGCCTGGTCAAGCACGCGCTGGAATTGAACAACCGCGACCGCCCGGCCCCGCCCGCGCCGC
CGCCGGAACAGGCCAGCCGCCTGCTCGGCGACTCCGGCGCGATGGAAGGCCTGCGCGCCACCATCGGCAAGGTCGCGCGC
AGCCAGGCGCCGGTCTACATCGTCGGCGAATCGGGCGTGGGCAAGGAGCTGGTCGCCCGCACCATCCACGAGCAAGGCGC
ACGCGCGGCCGGCCCGTTCGTGCCAGTCAACTGTGGCGCCATCCCCGCCGAACTGATGGAAAGCGAATTCTTCGGCCACA
AGAAGGGCAGCTTCACCGGCGCACATGCCGACAAGCCCGGCCTGTTCCAGGCCGCGCATGGCGGCACGCTGTTTCTGGAC
GAAGTGGCCGAATTGCCGCTGCAGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGGTGCGCCCGGTGGGCGC
CTCCAGCGAGTCGCTGGTGGACGTGCGCATTCTCTCGGCCACCCACAAGAACCTGGGCGACCTGGTCTCCGACGGCCGTT
TTCGCCACGACCTGTACTACCGCATCAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAACGCGGCGGCGACCTGCCG
CAACTGGCCGCGGCCATCATCGCGCGCCTGGCACATAGCCACGGCCGGCCGATTCCGCTGCTGACCCAGTCCGCGCTCGA
CGCGCTGGACCAGTACGGCTTCCCGGGCAATGTGCGCGAGCTGGAAAACATCCTAGAACGCGCCCTGGCCCTGGCCGAAG
ACGACCAGATCAGCGCCACCGACCTGCGCCTGCCCGCCCACGGCGGCCATCGCCTGGCCGCCACACCCGGCAGCGCCGCC
GTCGAACCCCGCGAAGCGGTGGTGGACATCGACCCCGCCTCGGCCGCCCTGCCTTCCTACATCGAGCAACTGGAGCGCGC
CGCGATCCAGAAGGCACTGGAAGAAAACCGCTGGAACAAGACCAAGACCGCCGCGCAGCTGGGCATCACGTTTCGGGCGT
TGCGTTATAAATTGAAGAAGTTGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-461)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (142-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.261	99.138	0.627
pilR	Acinetobacter baumannii strain A118	48.922	100	0.489