Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | QUF32_RS14345 | Genome accession | NZ_AP028128 |
| Coordinates | 3043159..3043749 (-) | Length | 196 a.a. |
| NCBI ID | WP_020329445.1 | Uniprot ID | S7I501 |
| Organism | Vibrio fluvialis strain IDH05335 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3038159..3048749
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUF32_RS14325 (KKIDH5335_27500) | aroB | 3039077..3040162 (-) | 1086 | WP_024374091.1 | 3-dehydroquinate synthase | - |
| QUF32_RS14330 (KKIDH5335_27510) | aroK | 3040190..3040708 (-) | 519 | WP_004728569.1 | shikimate kinase AroK | - |
| QUF32_RS14335 (KKIDH5335_27520) | pilQ | 3040896..3042632 (-) | 1737 | WP_286236258.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| QUF32_RS14340 (KKIDH5335_27530) | pilP | 3042657..3043169 (-) | 513 | WP_020329446.1 | pilus assembly protein PilP | Machinery gene |
| QUF32_RS14345 (KKIDH5335_27540) | pilO | 3043159..3043749 (-) | 591 | WP_020329445.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| QUF32_RS14350 (KKIDH5335_27550) | pilN | 3043742..3044332 (-) | 591 | WP_020329444.1 | PilN domain-containing protein | Machinery gene |
| QUF32_RS14355 (KKIDH5335_27560) | pilM | 3044322..3045326 (-) | 1005 | WP_020329442.1 | type IV pilus assembly protein PilM | Machinery gene |
| QUF32_RS14360 (KKIDH5335_27570) | - | 3045469..3047949 (+) | 2481 | WP_222733502.1 | PBP1A family penicillin-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22720.13 Da Isoelectric Point: 4.7023
>NTDB_id=103956 QUF32_RS14345 WP_020329445.1 3043159..3043749(-) (pilO) [Vibrio fluvialis strain IDH05335]
MANLQELELDEIAEWPLLPQLAVLLLLVLALQGAGYWVYMLPKQDALEGLKQQEQTLKSTIRIKASKVATLPKLKIQLDE
LAERYDFLLRQLPVQKELASMLASVNELGLENTLTFTRIDWGEKQNQEFLYRLPLNIELTGNYHNIGDFSEAIARLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKPEVSDEK
MANLQELELDEIAEWPLLPQLAVLLLLVLALQGAGYWVYMLPKQDALEGLKQQEQTLKSTIRIKASKVATLPKLKIQLDE
LAERYDFLLRQLPVQKELASMLASVNELGLENTLTFTRIDWGEKQNQEFLYRLPLNIELTGNYHNIGDFSEAIARLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKPEVSDEK
Nucleotide
Download Length: 591 bp
>NTDB_id=103956 QUF32_RS14345 WP_020329445.1 3043159..3043749(-) (pilO) [Vibrio fluvialis strain IDH05335]
ATGGCTAACTTGCAGGAACTGGAACTGGATGAAATCGCTGAATGGCCTTTGTTGCCTCAGCTGGCCGTGTTGTTACTGCT
GGTTCTGGCATTGCAAGGTGCGGGCTATTGGGTATATATGTTGCCCAAGCAGGATGCGCTCGAAGGTTTAAAACAGCAGG
AACAAACGCTCAAATCGACGATACGTATCAAAGCCAGCAAAGTGGCCACGTTACCCAAACTCAAAATCCAACTGGATGAA
CTGGCAGAACGGTATGACTTCCTGCTGCGTCAACTGCCGGTGCAAAAAGAGCTTGCCAGTATGCTGGCGTCGGTTAACGA
GCTGGGGCTGGAAAATACGCTGACGTTCACGCGGATTGACTGGGGGGAGAAGCAGAATCAGGAATTCCTCTATCGTCTGC
CACTCAATATCGAACTGACTGGCAATTATCACAACATCGGCGACTTTTCCGAAGCGATTGCGCGCTTGCCACGCATTATC
AACTTTGACGATGTCGATTGGCAGCGCGTCAGTCAGGAGAGCAGCACGCTGCACTTTCGCGTCCGCGCTTACACCTATCA
GTTCAAACCGGAGGTGAGCGATGAAAAATAA
ATGGCTAACTTGCAGGAACTGGAACTGGATGAAATCGCTGAATGGCCTTTGTTGCCTCAGCTGGCCGTGTTGTTACTGCT
GGTTCTGGCATTGCAAGGTGCGGGCTATTGGGTATATATGTTGCCCAAGCAGGATGCGCTCGAAGGTTTAAAACAGCAGG
AACAAACGCTCAAATCGACGATACGTATCAAAGCCAGCAAAGTGGCCACGTTACCCAAACTCAAAATCCAACTGGATGAA
CTGGCAGAACGGTATGACTTCCTGCTGCGTCAACTGCCGGTGCAAAAAGAGCTTGCCAGTATGCTGGCGTCGGTTAACGA
GCTGGGGCTGGAAAATACGCTGACGTTCACGCGGATTGACTGGGGGGAGAAGCAGAATCAGGAATTCCTCTATCGTCTGC
CACTCAATATCGAACTGACTGGCAATTATCACAACATCGGCGACTTTTCCGAAGCGATTGCGCGCTTGCCACGCATTATC
AACTTTGACGATGTCGATTGGCAGCGCGTCAGTCAGGAGAGCAGCACGCTGCACTTTCGCGTCCGCGCTTACACCTATCA
GTTCAAACCGGAGGTGAGCGATGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
79.592 |
100 |
0.796 |
| pilO | Vibrio campbellii strain DS40M4 |
68.947 |
96.939 |
0.668 |