Detailed information NTG1039450

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACCO40_RS17865
• Genome accession: NZ_CP167793
• Coordinates: 3486857..3488014 (-)
• Length: 385 a.a.
• NCBI ID: WP_014115355.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain SHT-15
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3481857..3493014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCO40_RS17835 (ACCO40_17835)	-	3482109..3482528 (-)	420	WP_014115350.1	TIGR03826 family flagellar region protein	-
ACCO40_RS17840 (ACCO40_17840)	comFC	3482601..3483323 (-)	723	WP_139372595.1	double zinc ribbon domain-containing protein	Machinery gene
ACCO40_RS17845 (ACCO40_17845)	-	3483287..3483583 (-)	297	WP_014115352.1	late competence development ComFB family protein	-
ACCO40_RS17850 (ACCO40_17850)	comFA	3483652..3485034 (-)	1383	WP_114151413.1	ATP-dependent helicase ComFA	Machinery gene
ACCO40_RS17855 (ACCO40_17855)	-	3485142..3485987 (-)	846	WP_114151175.1	DegV family protein	-
ACCO40_RS17860 (ACCO40_17860)	degU	3486085..3486774 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACCO40_RS17865 (ACCO40_17865)	degS	3486857..3488014 (-)	1158	WP_014115355.1	two-component sensor histidine kinase DegS	Regulator
ACCO40_RS17870 (ACCO40_17870)	-	3488230..3488883 (+)	654	WP_114151174.1	YigZ family protein	-
ACCO40_RS17875 (ACCO40_17875)	-	3488883..3490007 (+)	1125	WP_061186931.1	LCP family protein	-
ACCO40_RS17880 (ACCO40_17880)	-	3490080..3491156 (-)	1077	WP_061186932.1	MraY family glycosyltransferase	-
ACCO40_RS17885 (ACCO40_17885)	-	3491301..3492494 (-)	1194	WP_114151412.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44987.78 Da
• Isoelectric Point: 6.2957

>NTDB_id=1039450 ACCO40_RS17865 WP_014115355.1 3486857..3488014(-) (degS) [Bacillus spizizenii strain SHT-15]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=1039450 ACCO40_RS17865 WP_014115355.1 3486857..3488014(-) (degS) [Bacillus spizizenii strain SHT-15]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAGCTGAAACAAATTAAACAGCAGG
TGTATGAAGTTATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGGTTCAGTGAAGAAGAAATCCGCAATGCTTACGAAAAAGCCCATAAACTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAACTGCGGGAACGCCGGGATGACTTAGAGCGAAGATTGTTAGGCCTTCAGGAAATCATTGAGC
GGTCTGAATCATTAGTAAGCCAAATAACAGTTGTGCTTAACTACTTGAATCAGGATTTGCGCGAGGTCGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCACAGGAAGAAGAGCGAAAAAGAGTCTCCAGAGA
AATTCATGACGGACCTGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTACTGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGTGAAACAGAGGATCAGCGGCTTGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGAAAAGGGTTCGACTTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATCTATTGGAAGGAACCATGACAATAGATTCAAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.74	100	0.997