Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACCO40_RS15825 Genome accession   NZ_CP167793
Coordinates   3079592..3081889 (-) Length   765 a.a.
NCBI ID   WP_268454382.1    Uniprot ID   -
Organism   Bacillus spizizenii strain SHT-15     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3074592..3086889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO40_RS15785 (ACCO40_15785) - 3075062..3075493 (+) 432 WP_014114977.1 Na(+)/H(+) antiporter subunit B -
  ACCO40_RS15790 (ACCO40_15790) - 3075493..3075834 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ACCO40_RS15795 (ACCO40_15795) - 3075827..3077308 (+) 1482 WP_041521055.1 Na+/H+ antiporter subunit D -
  ACCO40_RS15800 (ACCO40_15800) - 3077314..3077790 (+) 477 WP_014114979.1 Na+/H+ antiporter subunit E -
  ACCO40_RS15805 (ACCO40_15805) - 3077790..3078074 (+) 285 WP_014114980.1 Na(+)/H(+) antiporter subunit F1 -
  ACCO40_RS15810 (ACCO40_15810) mnhG 3078058..3078432 (+) 375 WP_014114981.1 monovalent cation/H(+) antiporter subunit G -
  ACCO40_RS15815 (ACCO40_15815) - 3078471..3078851 (-) 381 WP_003220719.1 hotdog fold thioesterase -
  ACCO40_RS15820 (ACCO40_15820) comA 3078867..3079511 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACCO40_RS15825 (ACCO40_15825) comP 3079592..3081889 (-) 2298 WP_268454382.1 histidine kinase Regulator
  ACCO40_RS15830 (ACCO40_15830) comX 3081897..3082058 (-) 162 WP_010331692.1 competence pheromone ComX -
  ACCO40_RS15835 (ACCO40_15835) - 3082072..3082932 (-) 861 WP_372401933.1 polyprenyl synthetase family protein -
  ACCO40_RS15840 (ACCO40_15840) degQ 3083117..3083257 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACCO40_RS15845 (ACCO40_15845) - 3083479..3083604 (+) 126 WP_014114985.1 hypothetical protein -
  ACCO40_RS15850 (ACCO40_15850) - 3083719..3084087 (+) 369 WP_014114986.1 hypothetical protein -
  ACCO40_RS15855 (ACCO40_15855) pdeH 3084063..3085292 (-) 1230 WP_014114987.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88480.89 Da        Isoelectric Point: 8.5639

>NTDB_id=1039443 ACCO40_RS15825 WP_268454382.1 3079592..3081889(-) (comP) [Bacillus spizizenii strain SHT-15]
MKSRNNKISVVLVLLSLIYVIYLTYISNNNLLVGATVSKGKNGDIVITNVDEFSMASYSGIEKGDIVKSINNKKINTNEI
KMNKLKNVSSMIVERNGQNLELKMTLFNDKNFTTYLIPLIFYIVCLFCCLFILKINESKNLLSAVVLIIFLLSASIAYIS
AGGSAKGDMLSRLIMVVTLISVPLNYLLFLYQYFKELGTKLFDKKVFILYLIPVINVVCEMFRSHLFFRDYVPKLNLLAF
FFLFIIVGIYFSIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMLLIPFSLVYQFMTN
KIYNVDFILSRLRYYGFLALTPTIILITTIELIRSPESEFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSERFNYQD
SIYKFTQLIRDSSSVSQVFGELKTTVLEVLLVSRAYIYEVSLDGNIKPYEEINSNSYHDIYQKQFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDNNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=1039443 ACCO40_RS15825 WP_268454382.1 3079592..3081889(-) (comP) [Bacillus spizizenii strain SHT-15]
ATGAAGTCTAGAAATAACAAAATTTCTGTAGTGTTAGTTTTATTAAGTTTGATATATGTAATTTATTTGACCTATATAAG
CAATAATAATTTATTAGTCGGGGCAACTGTTTCTAAAGGAAAAAATGGTGACATTGTAATTACCAATGTAGATGAATTTT
CAATGGCATCATACAGCGGTATAGAAAAAGGAGATATCGTAAAGAGTATTAATAATAAAAAGATAAACACAAACGAAATA
AAGATGAACAAACTAAAAAATGTAAGTTCAATGATTGTGGAAAGAAATGGACAAAATCTAGAGCTGAAAATGACCTTATT
TAATGATAAAAATTTTACTACTTACTTAATACCATTAATATTTTATATCGTTTGTTTATTTTGTTGCTTATTTATATTGA
AAATAAATGAATCAAAAAACCTCCTCTCAGCTGTAGTTTTAATTATCTTTCTGTTATCTGCTTCTATTGCATATATAAGC
GCTGGAGGGTCTGCTAAGGGAGATATGCTGAGCAGGCTTATAATGGTGGTAACATTAATATCTGTGCCGCTAAACTATCT
TCTCTTTCTTTATCAATATTTTAAAGAATTAGGCACCAAATTATTTGATAAAAAAGTTTTTATTTTATATTTGATTCCGG
TCATAAATGTAGTATGTGAAATGTTTCGTTCACATCTTTTCTTTCGTGATTATGTTCCTAAATTAAATTTACTTGCTTTT
TTCTTTTTATTTATCATAGTAGGGATTTATTTTAGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTCCTCACTATCATTAATATCTTTTCTTTTTCACCTTTTCTGTGTTTATATTTGATACCTTACGTGTTTTTAAATG
CACATTATGTTTCTTCTTTTTTAGCGGCTTCATTTATGCTGCTAATACCATTCTCATTGGTATATCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGATATTATGGCTTTTTAGCTTTAACGCCAACAATTATTTTAAT
AACAACAATTGAGTTGATTAGGAGCCCTGAGAGTGAGTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATAATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCTGAAAGGTTTAATTATCAAGAC
AGTATATATAAGTTCACGCAACTGATTAGAGATTCATCTTCTGTATCTCAGGTTTTTGGGGAACTGAAAACTACTGTTCT
TGAGGTTTTGCTTGTTAGCAGAGCCTATATTTATGAAGTTTCTTTGGATGGTAATATAAAACCTTACGAAGAAATAAACT
CAAATTCATACCACGATATCTACCAAAAACAGTTTAGAAAAGTCACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAA
GAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAAGCGCCAGTGTGA
GCTGTTTTTGGCTGATTTTAAAAAGGATAATAATCCGTGTCAGGAAGAGGTACAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAACTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTG
AAGGCGCTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGCAGATTTACGGC
TTCGCTTGATCTGGATTCGCAGTTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCCCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTAGGGTTTGAT
CAAGAAAAAAATAATGAACATTCCATGAGTATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGACGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.902

100

0.584


Multiple sequence alignment