Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACDI99_RS14290 | Genome accession | NZ_CP167783 |
| Coordinates | 3005441..3006025 (-) | Length | 194 a.a. |
| NCBI ID | WP_005017910.1 | Uniprot ID | A0A062C4D5 |
| Organism | Acinetobacter radioresistens strain E3263934 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3000441..3011025
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDI99_RS14270 (ACDI99_14270) | katE | 3000665..3002788 (+) | 2124 | WP_005024128.1 | catalase HPII | - |
| ACDI99_RS14275 (ACDI99_14275) | - | 3003102..3003749 (+) | 648 | WP_005404646.1 | hypothetical protein | - |
| ACDI99_RS14280 (ACDI99_14280) | - | 3004026..3004352 (+) | 327 | WP_005017916.1 | hypothetical protein | - |
| ACDI99_RS14285 (ACDI99_14285) | - | 3004429..3005295 (+) | 867 | WP_034669792.1 | SDR family oxidoreductase | - |
| ACDI99_RS14290 (ACDI99_14290) | ssb | 3005441..3006025 (-) | 585 | WP_005017910.1 | single-stranded DNA-binding protein | Machinery gene |
| ACDI99_RS14295 (ACDI99_14295) | - | 3006077..3007441 (-) | 1365 | WP_005017908.1 | MFS transporter | - |
| ACDI99_RS14300 (ACDI99_14300) | - | 3007590..3008672 (-) | 1083 | WP_034669790.1 | DUF475 domain-containing protein | - |
| ACDI99_RS14305 (ACDI99_14305) | tenA | 3008913..3009587 (+) | 675 | WP_005017903.1 | thiaminase II | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21073.77 Da Isoelectric Point: 6.4820
>NTDB_id=1039379 ACDI99_RS14290 WP_005017910.1 3005441..3006025(-) (ssb) [Acinetobacter radioresistens strain E3263934]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQGDQAGAGFGGDQGYGQPRFNNNQGSQGGYGNGNQQGSGFNNNSNQG
GGYGNNNPGGFAPKAPQSAPASQVPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQGDQAGAGFGGDQGYGQPRFNNNQGSQGGYGNGNQQGSGFNNNSNQG
GGYGNNNPGGFAPKAPQSAPASQVPADLDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=1039379 ACDI99_RS14290 WP_005017910.1 3005441..3006025(-) (ssb) [Acinetobacter radioresistens strain E3263934]
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGGACTTTAGGGCGCGATCCAGAGACAAAAACTTTCCCAAATGGCGGCTC
TTTAACACAGTTTTCTATCGCAACGAGTGAATCGTGGACAGATAAAAGCACAGGTGAACGTAAAGAACAGACAGAATGGC
ACCGTATTGTGCTACACAACCGTCTAGGTGAAATTGCCCAGCAATATTTACGTAAAGGTTCAAAAGTTTATATTGAAGGT
TCATTGCGTACCCGTCAATGGACCGACCAGAACGGTCAGGAACGTTATACTACCGAGATTCGAGGTGAACAGATGCAGAT
GCTAGACTCAGGCCGACAGCAGGGCGATCAGGCAGGTGCAGGTTTTGGTGGTGATCAAGGCTATGGTCAACCACGTTTTA
ACAATAATCAGGGTAGCCAGGGCGGTTATGGTAACGGCAACCAGCAGGGTAGCGGTTTTAATAATAACAGCAACCAAGGT
GGCGGTTATGGCAATAATAACCCGGGCGGTTTCGCACCTAAAGCTCCTCAGTCAGCTCCAGCCTCTCAAGTTCCGGCTGA
CCTGGATGATGATCTGCCATTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGGACTTTAGGGCGCGATCCAGAGACAAAAACTTTCCCAAATGGCGGCTC
TTTAACACAGTTTTCTATCGCAACGAGTGAATCGTGGACAGATAAAAGCACAGGTGAACGTAAAGAACAGACAGAATGGC
ACCGTATTGTGCTACACAACCGTCTAGGTGAAATTGCCCAGCAATATTTACGTAAAGGTTCAAAAGTTTATATTGAAGGT
TCATTGCGTACCCGTCAATGGACCGACCAGAACGGTCAGGAACGTTATACTACCGAGATTCGAGGTGAACAGATGCAGAT
GCTAGACTCAGGCCGACAGCAGGGCGATCAGGCAGGTGCAGGTTTTGGTGGTGATCAAGGCTATGGTCAACCACGTTTTA
ACAATAATCAGGGTAGCCAGGGCGGTTATGGTAACGGCAACCAGCAGGGTAGCGGTTTTAATAATAACAGCAACCAAGGT
GGCGGTTATGGCAATAATAACCCGGGCGGTTTCGCACCTAAAGCTCCTCAGTCAGCTCCAGCCTCTCAAGTTCCGGCTGA
CCTGGATGATGATCTGCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.471 |
100 |
0.541 |
| ssb | Vibrio cholerae strain A1552 |
44.39 |
100 |
0.469 |
| ssb | Neisseria gonorrhoeae MS11 |
41 |
100 |
0.423 |
| ssb | Neisseria meningitidis MC58 |
40.5 |
100 |
0.418 |